Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas simiae WCS417

 Score =  157 bits (396), Expect = 1e-42
 Identities = 120/483 (24%), Positives = 225/483 (46%), Gaps = 20/483 (4%)

Query: 5   IATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTMWIV 64
           I  +  +    +SD++LGGR++   ++A S G +  S  + +G  G +  S G+   WI 
Sbjct: 21  IGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIYMS-GLSESWIA 79

Query: 65  VGNTIIGSFLAWQVLGKKTREMTQRLG-ASTMPSFLEKRYKSKN--LESLTAFIIFFFLV 121
           +G  I+G++L W  +  + R  T+  G A T+P +   R++ K+  L  ++A +I  F  
Sbjct: 80  IG-LIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRIISAVVILVFFT 138

Query: 122 PYSAS-IYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGV 180
            Y AS I  G       FG+S   A    AA T  Y + GGF+A +  D VQ  +M+  +
Sbjct: 139 IYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTDTVQATLMIFAL 198

Query: 181 LL--MVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGLPQ 238
           +L  ++  L +    GG       + + DP     +   +FI I+ L +   +G +G P 
Sbjct: 199 ILTPIIVLLAT----GGVDTTFLAIEAKDPTNFDMLKNTTFIGIISL-MGWGLGYFGQPH 253

Query: 239 MIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPDMI 298
           ++ +F    S K+   A+ +S  +  +   G   +G     ++      A     + + +
Sbjct: 254 ILARFMAADSVKSIAKARRISMTWMILCLGGTVAVGFFGIAYFSAHPEVAGPVNENHERV 313

Query: 299 VPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNTMI 358
             ++ ++    W+A ++L  +++A MSTL+  +L  SS ++ DF K  L+ + S    + 
Sbjct: 314 FIELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKTFLRKNASQVELVW 373

Query: 359 LMRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYFLGLYWKRTTKEGVWAG 418
           + RL+ +L  +++  +A  P + VL L++ +W            + + WK  T+ G  AG
Sbjct: 374 VGRLMVLLVALIAIAMAANPENRVLGLVSYAWAGFGAAFGPVVLISVIWKGMTRNGALAG 433

Query: 419 I-TSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLIT----KPFEREHIDYI 473
           I   A+ +++    +F +  +Y    G +     I+ V  +   T    + F+    DY 
Sbjct: 434 ILVGAITVIVW--KHFELLGLYEIIPGFIFASLAIYFVSKLGAPTAGMVERFDAAEKDYN 491

Query: 474 FNK 476
            NK
Sbjct: 492 LNK 494