Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 483 a.a., sodium-solute symporter, putative from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 8e-21
 Identities = 101/441 (22%), Positives = 179/441 (40%), Gaps = 38/441 (8%)

Query: 3   IGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKM---GWS---- 55
           I I     KR+K  +DF + GR++  +M   +    +F +   +G   K    G +    
Sbjct: 14  IAIGLYAAKRVKNTTDFAIAGRHLPLFMIVTTTFATWFGSETVLGIPAKFIEGGLNGVVE 73

Query: 56  --FGIPTMWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTA 113
             FG  T  I+VG    G      +L              T+  +  +RY      + + 
Sbjct: 74  DPFGAGTCLILVGLFFAGKLYRMTLL--------------TISDYYRERYGRTVEVACSL 119

Query: 114 FIIFFFLVPYSASIYK-GL--NFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADF 170
            I+  +L   SA +   GL  N L  G    PM   I + ++ A Y  FGG  +  + DF
Sbjct: 120 IIMLSYLGWVSAQVTALGLVFNLLSAGVISIPMGMVIGVISILA-YTLFGGMWSVAVTDF 178

Query: 171 VQGCIMVIGVLLMVFFLGSNPEVGGFSGMLSNLSSIDPMLVTPINEASF---IPIMGLAL 227
           +Q  I+V G+ ++  F GS    GG   +++   S D     P  E S+   +     A+
Sbjct: 179 IQMIILVAGLAVIAMFAGS--MAGGADKVVAFAVSKDLFKFWP--EPSWHDMVFFFAAAI 234

Query: 228 LTSIGSWGLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASK 287
              +GS     +  +  +  S KAA     +      +  F   ++   + L  P+    
Sbjct: 235 TMMLGSIPQQDVFQRVMSANSVKAATRGPVIGGLAYILFAFVPMFLVASALLIMPE--QT 292

Query: 288 AAAGLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGRL 347
           A      P  ++P ++   +P  +  L    ++SA  ST AS  L + SV   + +  + 
Sbjct: 293 ATLLKEDPQKVLPTLVLQKMPFVMQVLFFGALLSAIKST-ASATLLAPSVTFTENIWRQF 351

Query: 348 KTDLSDKNTMILMRLLCVLFVVLSFILAI-VPNSYVLSLMALSWGLVSGCLLAPYFLGLY 406
           +   +D+  ++ MR+  +LF       AI +  + +  L++ ++ +       P   GLY
Sbjct: 352 RPAGTDRQNLMTMRITVLLFSAAVLAYAIRMQGTPIYELVSGAYQVPLVGAFVPLVCGLY 411

Query: 407 WKRTTKEGVWAGITSALAIML 427
           W+R T +G  A I   + + L
Sbjct: 412 WRRATTQGAVASIVLGIGVWL 432