Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 554 a.a., acetate permease from Pseudomonas putida KT2440

 Score =  108 bits (271), Expect = 4e-28
 Identities = 107/455 (23%), Positives = 192/455 (42%), Gaps = 49/455 (10%)

Query: 3   IGIATVTKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTMW 62
           +GI     KR K  SD+   G  +  + +  +    Y SA  F+G +  +  S     ++
Sbjct: 51  LGITYWASKRNKSASDYYAAGGKITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIY 110

Query: 63  IVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTA----FIIFF 118
                  IG  + W ++     E  + LG  T       R   K + +L+A     ++ F
Sbjct: 111 S------IGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQKEIRTLSASGSLVVVAF 164

Query: 119 FLVPYSASIYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVI 178
           +L+       K +  LF   G+    A IL+  L  +Y+ FGG +A T    ++  +++ 
Sbjct: 165 YLIAQMVGAGKLIELLF---GLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLS 221

Query: 179 GVLLMVFFLGSNPEVG-GFSGMLSN----------LSSIDPMLVTPINEASFIPIMGLAL 227
           G   M   +  +  VG  F+ + S           + S   ++  PI+  S    +GLAL
Sbjct: 222 GASFMALMVMKH--VGFDFNTLFSEAIKVHAKGEAIMSPGGLVKDPISAFS----LGLAL 275

Query: 228 LTSIGSWGLPQMIHKFYTIKSEKAAVSAKWVSTAF-------AFIITFGAAYIGTVSRLF 280
           +   G+ GLP ++ +F+T+   K A  +   +T F        FII FGA  + + +   
Sbjct: 276 M--FGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFGAILLVSTN--- 330

Query: 281 YPDAASKAAAGLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSI 340
            P+    A A L   +M    +            I  +  +  ++ +A L LA +S VS 
Sbjct: 331 -PEFKDAAGALLGGNNMAAVHLANAVGGSVFLGFISAVAFATILAVVAGLTLAGASAVSH 389

Query: 341 D-FVKGRLKTDLSDKNTMILMRLLCVLFVVLSFILAIV-PNSYVLSLMALSWGLVSGCLL 398
           D +     K   +DK+ + + ++  V   VL+  L I+     +  ++ L++ + + C  
Sbjct: 390 DLYASVWRKGKANDKDEIRVSKITTVALGVLAIGLGILFEKQNIAFMVGLAFSIAASCNF 449

Query: 399 APYFLGLYWKRTTKEGV----WAGITSALAIMLGG 429
               L +YWK+ T  G     W G+ SA+ +M+ G
Sbjct: 450 PVLLLSMYWKKLTTRGAMIGGWLGLVSAVTLMILG 484