Pairwise Alignments

Query, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  200 bits (508), Expect = 1e-55
 Identities = 150/513 (29%), Positives = 250/513 (48%), Gaps = 57/513 (11%)

Query: 11  KRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGKMGWSFGIPTMWIVVGNTII 70
           K      D+++GGR ++P++ A SYG  + S    +GF G  G  FG+  +W+   N  +
Sbjct: 26  KGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGFSGL-FGMSLLWLTFLNIFL 84

Query: 71  GSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIFFFLVPYSASIYKG 130
           G F+A+   GK+TR+M   L A T P  L KR++SK ++  +  +IF  +  Y+A++  G
Sbjct: 85  GIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQWFSGLLIFCAMPIYAAAVLIG 144

Query: 131 -LNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGVLLMVFFLGS 189
              F+     IS   A ++ + + A+Y+  GG       D  QG IM  G+L +++   +
Sbjct: 145 AARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTDAFQGTIMFFGMLFLLYM--T 202

Query: 190 NPEVGGFS---GMLSNLSSIDPMLVTPINEASF--IPIMG----------LALLTSIGSW 234
              +GG +     +SN+S + P  +  +  A +  +P  G          + L   IG  
Sbjct: 203 YDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFGSPMWWTIVSSIILGVGIGVL 262

Query: 235 GLPQMIHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLT- 293
             PQ+I +F T+KS +    A  +   F  I T  A  +GT+S +++ +     + G T 
Sbjct: 263 AQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVGTLSNVYFMNTEGVLSIGATV 322

Query: 294 -------SPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKGR 346
                  + D I+P  +  A+P+W   + LV +++A+MST++S   A  + +  D     
Sbjct: 323 SEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAAMSTISSQFHAQGTSIGRDV---- 378

Query: 347 LKTDLSDK--NTMILMRLLCVLFVVLSFILA-IVPNSYVLSLMALSWGLVSGCLLAPYFL 403
            +T    K  N++I+ RL  ++ +V++ IL  I+P   V    AL +GL S   L  Y L
Sbjct: 379 YETICGKKGLNSVIITRLGIIVAIVIAAILGYILPGGIVARGTALFFGLCSAAFLPAYAL 438

Query: 404 GLYWKRTTKEGVWAGI------------------TSALAI--MLGGAYYFGINSVYMPAV 443
           GL+WKRTTKEG  AG+                  ++AL I  ML G     I+++  P V
Sbjct: 439 GLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALGISKMLIGRDVL-ISAMPWPYV 497

Query: 444 GSLAMIAPI--FVVMAVSLITKPFEREHIDYIF 474
             + +  P+     + VSL+TK   +EH+   F
Sbjct: 498 DPMVISLPLAFIATVIVSLLTKAPSKEHLKKCF 530