Pairwise Alignments

Query, 299 a.a., DMT family transporter from Methanococcus maripaludis S2

Subject, 296 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 58/262 (22%), Positives = 121/262 (46%), Gaps = 14/262 (5%)

Query: 40  LTFLRFLIASAIILPLVLKKEHKNLKLKKNDAYIVILAGLFGMFGYHALFFMSLEYITAI 99
           L +LRF IA A+ +P  LK+      +  +  ++V L    G F +       +   +A+
Sbjct: 32  LAWLRFGIA-ALAMPHWLKRTPDEPPMTAHTRWLVFLESFLGNFLFSICMLFGVSLTSAV 90

Query: 100 NSALLMATTPMVTSIIAAVVLGEYFGIKRIFAVFIAFFGV-LLTITNGNLEVLKNLSFN- 157
           ++ ++MA+ P   ++ + + L E   ++   A+  A  G+ LL ++  +     + S   
Sbjct: 91  SAGVIMASIPACVAVASWLFLRERITVRIGLAIACAALGIGLLALSPAHASATPSASPAS 150

Query: 158 ---IGDVIMFSAVLCMALYAVLSKKVAQKYSP----SLILTYGYILTVVLLIPYMILKNP 210
              +G++++F AVLC   YAV+ K +  +  P    SLI  +G++L++   I +  L+  
Sbjct: 151 MPWLGNLLVFCAVLCETAYAVIGKSLTGRLGPKRIASLINLWGFVLSMPFGI-WFALQFD 209

Query: 211 INVILNASLETWLSIIYMAVFASVLAQLLQQISLKYHGASKTMLFYQFVPIIVIGLSAIF 270
              +      TW  ++  A+ AS+    L    L+   A++  +F   +P+    +  + 
Sbjct: 210 FTAV---RFGTWALLVAYALAASIWTVWLWMTGLRNVPAAQAGVFAVLLPVSAALVGVLV 266

Query: 271 LKEPFTKITAISTLFIMGGVYI 292
           L E  +    ++ +  + GV +
Sbjct: 267 LGESLSTTQLLAFVIALVGVVL 288



 Score = 30.0 bits (66), Expect = 7e-05
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 88  LFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYFGIKRIFAVFIAFFGVLLTITNG 146
           L+   L  + A  + +     P+  +++  +VLGE     ++ A  IA  GV+L    G
Sbjct: 235 LWMTGLRNVPAAQAGVFAVLLPVSAALVGVLVLGESLSTTQLLAFVIALVGVVLATWPG 293