Pairwise Alignments

Query, 299 a.a., DMT family transporter from Methanococcus maripaludis S2

Subject, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  103 bits (257), Expect = 5e-27
 Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 6/267 (2%)

Query: 7   KYELFLLMIPAVFFGAGAFITGKIGILELSWDELTFLRFLIASAIILPLVLKKEHKNLKL 66
           KY LF L+  AV    G  I  K+    ++   + F R+ IA  I+ PLV +   ++ + 
Sbjct: 4   KYLLFSLL--AVLIWVGNTIVSKLAAGAIAPGTIAFERWFIAFVILTPLVYRDAWRHRRT 61

Query: 67  KKNDAYIVILAGLFGMFGYHALFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYFGI 126
                  +IL GL GM     L + +    TA N A++++  P++T I++AV L E    
Sbjct: 62  IAAHLPKLILLGLLGMAACQGLGYYAAGLTTATNMAIMLSLVPLLTLILSAVFLAERPSS 121

Query: 127 KRIFAVFIAFFGVLLTITNGNLEVLKNLSFNIGDVIMFSAVLCMALYAVLSKKVAQKYSP 186
             +    I+  G+ + +  G+   L +     GD +M +AVL  A Y +L ++ A   + 
Sbjct: 122 LAVIGGIISLSGIFIVLGQGDPSRLLSQGVGRGDAMMLAAVLAYAGYGILLRRWAIPLAT 181

Query: 187 SLILTYGYILTVVLLIPYMILKNPINVILNASLETWLSIIYMAVFASVLAQLLQQISLKY 246
              +       VVLL+P  +L  P  +    +L     ++Y A+  S+LA  +   ++K+
Sbjct: 182 WTSIYVQIGAAVVLLVPSYLLSAPSAL----TLPNTAMVLYAAIPGSILAPFVWMTAVKH 237

Query: 247 HGASKTMLFYQFVPIIVIGLSAIFLKE 273
            GA++T +F   +PI    ++AIFL E
Sbjct: 238 LGAARTAIFMNLIPIFTAIVAAIFLGE 264



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 13  LMIPAVFFGAGAFITGKIGILELSWDELTFLRFLIASAIILPLVLKKEHKNLKLKKNDAY 72
           +M+ AV   AG  I  +   + L+     +++   A  +++P  L      L L   +  
Sbjct: 157 MMLAAVLAYAGYGILLRRWAIPLATWTSIYVQIGAAVVLLVPSYLLSAPSALTLP--NTA 214

Query: 73  IVILAGLFGMFGYHALFFMSLEYITAINSALLMATTPMVTSIIAAVVLGEYFGIKRIFAV 132
           +V+ A + G      ++  +++++ A  +A+ M   P+ T+I+AA+ LGE   I  +   
Sbjct: 215 MVLYAAIPGSILAPFVWMTAVKHLGAARTAIFMNLIPIFTAIVAAIFLGEALYIYHLLGG 274

Query: 133 FIAFFGVLL 141
            +   G++L
Sbjct: 275 GMTVAGIIL 283



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 4/133 (3%)

Query: 162 IMFS--AVLCMALYAVLSKKVAQKYSPSLILTYGYILTVVLLIPYMILKNPINVILNASL 219
           ++FS  AVL      ++SK  A   +P  I    + +  V+L P ++ ++        + 
Sbjct: 6   LLFSLLAVLIWVGNTIVSKLAAGAIAPGTIAFERWFIAFVILTP-LVYRDAWRHRRTIAA 64

Query: 220 ETWLSIIYMAVFASVLAQLLQQISLKYHGASKTMLFYQFVPIIVIGLSAIFLKEPFTKIT 279
                +I + +      Q L   +     A+   +    VP++ + LSA+FL E  + + 
Sbjct: 65  HL-PKLILLGLLGMAACQGLGYYAAGLTTATNMAIMLSLVPLLTLILSAVFLAERPSSLA 123

Query: 280 AISTLFIMGGVYI 292
            I  +  + G++I
Sbjct: 124 VIGGIISLSGIFI 136