Pairwise Alignments

Query, 184 a.a., XRE family transcriptional regulator from Methanococcus maripaludis S2

Subject, 182 a.a., DNA-binding transcriptional repressor PuuR-putrescine from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 2e-14
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 34/179 (18%)

Query: 8   ISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTITTILKIANGLKISFTSLL 67
           + + L+ IR   GLS   ++K  GV+   +  IE+  V+P+I+++ K+ +G+ +S     
Sbjct: 3   VGERLQAIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLSGIPMSMVEFF 62

Query: 68  SEKEADVKTVELKKVSPIYDDTQ-KWRSYPLFTFED----------SRP-------FEIY 109
           S        VEL+  SP    TQ  ++++ L    D          S P        E+Y
Sbjct: 63  S--------VELEPQSP----TQIVYKAHELIDISDGAVTMKLVGKSHPNRAIAFLTEVY 110

Query: 110 HVEADSGMVMSSEGHIKNSEETITVYEGELTLSIEENTYTIPKGNSIRFKADVPHKYEN 168
              AD+G  M +     + EET  + EG L L +    + + +G+S  F++  PH++ N
Sbjct: 111 PPGADTGAEMLTH----DGEETGILLEGRLELVVGNEIFVLEEGDSYYFESTRPHRFRN 165