Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 380 a.a., putrescine ABC transporter, ATPase component (from data) from Pseudomonas simiae WCS417

 Score =  187 bits (474), Expect = 5e-52
 Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 16/305 (5%)

Query: 33  IDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLGY 92
           I  G I  L G SGSGK++ L  +AG   P  GRI      Y D +   +M P ER +  
Sbjct: 45  IKKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRI------YLDGEDITDMPPYERPINM 98

Query: 93  VFQNYALFPHLTVKENIEYGIKH--LSEEEKERRVFELLKLTQIEGLENRYPDQISGGQK 150
           +FQ+YALFPH+TV +NI +G++   + + E + RV E+LKL Q+     R P Q+SGGQ+
Sbjct: 99  MFQSYALFPHMTVAQNIAFGLQQDKIPKAEIDARVAEMLKLVQMSQYAKRKPHQLSGGQR 158

Query: 151 QRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAFV 210
           QRVALAR+LA  PK+LLLDEP  ALD   R +++  L  I + + +  V VTH  EEA  
Sbjct: 159 QRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMT 218

Query: 211 MAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNE-----NSPDF 265
           MAE++   H G I QIG+P +I+  P +  V + +G +NIF    +D  E       PD 
Sbjct: 219 MAERIAIMHLGWIAQIGSPIDIYETPTSRLVCEFIGNVNIFDTQVVDDAEGHAVLKCPDL 278

Query: 266 SILDYRDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTSL 325
               Y    ++    +KS   V++ IRPE + +         N     + D+   G  S+
Sbjct: 279 DRDIYVGYGIATSVEDKS---VTYAIRPEKLLVTTEMPTCEHNWSSGKVHDIAYLGGHSV 335

Query: 326 VYLEV 330
            Y+E+
Sbjct: 336 FYVEL 340