Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 344 a.a., Spermidine/putrescine import ATP-binding protein PotA from Pseudomonas lactucae CFBP13502

 Score =  179 bits (453), Expect = 1e-49
 Identities = 111/341 (32%), Positives = 174/341 (51%), Gaps = 34/341 (9%)

Query: 33  IDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLGY 92
           I  G    + G SGSGKT+ L  IAG   P  G I ++ E      +   + P +R++  
Sbjct: 27  IQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGSIRIHGE------EAAGLPPYQRDVNT 80

Query: 93  VFQNYALFPHLTVKENIEYG--IKHLSEEEKERRVFELLKLTQIEGLENRYPDQISGGQK 150
           VFQ+YALFPH+ V++N+ YG  +K +++ E+ +R  E L +  + G   R P Q+SGGQ+
Sbjct: 81  VFQDYALFPHMNVRDNVAYGLKVKGVAKAERLKRAEETLAMVALGGYGERKPVQLSGGQR 140

Query: 151 QRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAFV 210
           QRVALARAL   P++LLLDEP  ALD+  R +++  L+ +Q++L I  +FVTH   EA  
Sbjct: 141 QRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKLQRQLGITFIFVTHDQTEALS 200

Query: 211 MAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDFSILDY 270
           M+++V  F+ GRI+Q+ TP  ++  P    VA+ VG  N+           S        
Sbjct: 201 MSDRVAVFNKGRIEQVDTPRNLYMKPATAFVAEFVGTSNVIRGELAQRLSGSAQ------ 254

Query: 271 RDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTSLVYLEV 330
                            +F IRPE+++  D      E     ++ D+  +GS +  Y   
Sbjct: 255 -----------------AFSIRPEHVRFADGPLGTGEVEVRGLLHDIQYQGSATR-YELT 296

Query: 331 IQNGLRLMSKTQNDKF--KKLNYAVGEKCKIELLKDKITIL 369
           ++NG  L     N+++      Y VG+       ++ +T L
Sbjct: 297 LENGQALNISQANNQWLDTSSGYQVGQAITARWAREAMTPL 337