Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  186 bits (471), Expect = 1e-51
 Identities = 111/300 (37%), Positives = 166/300 (55%), Gaps = 20/300 (6%)

Query: 32  SIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLG 91
           +I  G ++ L G SG GKT+ L  +AGL  P  G+I +      D +   + S Q+R++ 
Sbjct: 28  TIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFI------DGEDVTHRSIQQRDIC 81

Query: 92  YVFQNYALFPHLTVKENIEYGIKHLS--EEEKERRVFELLKLTQIEGLENRYPDQISGGQ 149
            VFQ+YALFPH+++ EN+ YG+K L     E + RV E L +  +EG E+R+ DQISGGQ
Sbjct: 82  MVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQ 141

Query: 150 KQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEAF 209
           +QRVALARAL   PK+LL DEP S LD   R  +R+ +R +QK+  I  ++VTH   EAF
Sbjct: 142 QQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAF 201

Query: 210 VMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDFSILD 269
            +++ V+  + G I QIG+P++++  P +  +A  +G  N+F     D          +D
Sbjct: 202 AVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATFSD--------GYVD 253

Query: 270 YRDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTSLVYLE 329
                +       +  E   G+RPE I L    S++ E    C+I+ V   G    V +E
Sbjct: 254 IYGYHLPRPLHFGTQGEGMVGVRPEAITL----SDRGEESQRCVIRHVAYMGPQYEVTVE 309