Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 378 a.a., spermidine/putrescine ABC transporter ATP-binding protein PotA from Escherichia coli ECRC62

 Score =  194 bits (493), Expect = 3e-54
 Identities = 117/347 (33%), Positives = 199/347 (57%), Gaps = 10/347 (2%)

Query: 32  SIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQE-RNL 90
           +I++G  + L G SG GKT+ L  IAGL   D+GRI+++NE       +I   P E R +
Sbjct: 39  TINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNE-------DITHVPAENRYV 91

Query: 91  GYVFQNYALFPHLTVKENIEYGIKHLSEEEKE--RRVFELLKLTQIEGLENRYPDQISGG 148
             VFQ+YALFPH+TV EN+ +G++       E   RV E L++ Q+E    R P Q+SGG
Sbjct: 92  NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGG 151

Query: 149 QKQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEEA 208
           Q+QRVA+ARA+   P++LLLDE  SALD   R +++  L+++Q++L I  VFVTH  EEA
Sbjct: 152 QQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEA 211

Query: 209 FVMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYINIFSNAEIDYNENSPDFSIL 268
             M++++V   +GRI+Q GTP EI+  P N  VA  +G IN+F+   I+  +     + +
Sbjct: 212 LTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANV 271

Query: 269 DYRDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEKTENVFECIIKDVVNEGSTSLVYL 328
           + R+  + +    +   ++   +RPE++++ +IN +         +++   +G T    +
Sbjct: 272 EGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVV 331

Query: 329 EVIQNGLRLMSKTQNDKFKKLNYAVGEKCKIELLKDKITILMTQSVK 375
           E+    + ++S+  N+     ++++ +K  I  ++    +L  +  K
Sbjct: 332 ELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK 378