Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 341 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 5e-52
 Identities = 108/243 (44%), Positives = 154/243 (63%), Gaps = 16/243 (6%)

Query: 33  IDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGRIIVNNEIYYDSDKNINMSPQERNLGY 92
           I+SG ++ L G SGSGKT+ L  +AGL   D GRI      ++  +   N+  ++R +G+
Sbjct: 25  IESGELLALLGPSGSGKTTILRMVAGLEYSDGGRI------FFGDEDATNIPVRDRGVGF 78

Query: 93  VFQNYALFPHLTVKENIEYGIKHLSEEEKER-----RVFELLKLTQIEGLENRYPDQISG 147
           VFQ+YALFPH+T+ ENI +G+K +S+ ++++     RV ELL L +++GL +R+P QISG
Sbjct: 79  VFQHYALFPHMTLHENIAFGMK-VSKVKRDKAAIDARVKELLNLVKLDGLGDRFPAQISG 137

Query: 148 GQKQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSFEE 207
           GQ+QRVALARAL+  PK+LLLDEPF ALD   R  LR  LR I   L I  +FVTH  EE
Sbjct: 138 GQRQRVALARALSVDPKVLLLDEPFGALDANVRRDLRRWLREIHDSLGITTIFVTHDQEE 197

Query: 208 AFVMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVGYIN----IFSNAEIDYNENSP 263
           A  +A++VV  + G I Q GTP+E+   P ++ V + +G  N    +    ++   EN  
Sbjct: 198 ALDLADRVVILNQGGIVQQGTPKEVCRQPNSSFVMRFLGDANRVSGVARGGKVYVGENEL 257

Query: 264 DFS 266
            FS
Sbjct: 258 PFS 260