Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 285 a.a., permease from Methanococcus maripaludis S2

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 64/298 (21%), Positives = 140/298 (46%), Gaps = 31/298 (10%)

Query: 35  DSLKIVILLSIMIFSISYI--------RSYFPPEKTKKILERYSGVSGN-----IMASLL 81
           D++ I +  S+  FS +++         +Y   +   K+ +++  +  N     I+ASL+
Sbjct: 5   DAIFISLEHSLNFFSEAFVYILFGFLMSAYIKVKLKGKLRQKFVHILDNSKKSIIIASLI 64

Query: 82  GTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVV 141
           G V P CS S +P+       G  LG T+SF++++  +      +  +  G++IA++ ++
Sbjct: 65  GAVLPLCSASGIPVANVMNSKGTNLGTTMSFIVSASSITPLGVMLTYSLLGYEIAVMQIL 124

Query: 142 SGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVW 201
           + +++    G+I     +    EE  Y +++    +K L ++             +K + 
Sbjct: 125 ASLVLACSLGIIFYNDKIPFYFEE--YDVKAEETFLKVLFKQ-------------MKNLM 169

Query: 202 LYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPLYSNALGTIPIAEALIG 261
             I+IG  I   +  + P++++  YA   N +   +A++  + ++      IP+  ++  
Sbjct: 170 PAIMIGFLISGFMMYFIPKDIIL-YALSNNIMMYFYASVARIFIFLCPNAMIPLISSVAI 228

Query: 262 KGVGIGTALAFMMATTALSFPEAVLLRKVIKPKL-IAVFFGITSIAIVITGYLFNILL 318
            GV  G  L+F+++  ++  P    + KV   K+ +   FG+  +  +I G L +ILL
Sbjct: 229 NGVPKGLILSFLISAPSIGLPMISAMLKVYGKKIALKYVFGVIILGGII-GILVDILL 285