Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 300 a.a., permease from Methanococcus maripaludis S2

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 11/296 (3%)

Query: 29  VHFFIYDSLKIVILLSIMIFSISY--IRSYFPPEKTKKIL----ERYSGVSGNIMASLLG 82
           ++ + Y +++   +    +F I +  I S F   K  K+      R  GV G I A LLG
Sbjct: 10  IYLWYYFTVQFNQIAIYWVFGIVFGSIISVFGKNKIHKLFASIQNRRLGVFGMIPAGLLG 69

Query: 83  TVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVS 142
             +P C   ++PI   F ++G+      +F+++S ++N     +  A+ G     + ++S
Sbjct: 70  IASPICMYGTIPIAASFSKSGMRDDWLAAFMMSSILLNPQLI-IYSAALGETALAVRIIS 128

Query: 143 GVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWL 202
            +  GV+ GL++  L  + +   +       +R          LK  + +    +K    
Sbjct: 129 ALACGVIAGLLVKFLFNDRKFFNFSGFSEPTSRDNDPNVLLRLLKNIWRN----IKATGH 184

Query: 203 YILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPLYSNALGTIPIAEALIGK 262
           Y LIGI + A+   Y   +  A   G +    V+ A  I VPLY    GT+P+  A +  
Sbjct: 185 YFLIGILLSALFQHYVSPDAFANLFGSQRGFGVLMAATIGVPLYVCGGGTLPLLMAWLDS 244

Query: 263 GVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL 318
           G+ +G A AFM+   A        ++ V+  K    +   T I+ +I G + N+++
Sbjct: 245 GMSMGAAAAFMITGPATKITNLGAVKIVLGAKHFTAYVAFTIISAIIAGVVVNLMV 300