Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 346 a.a., predicted permease (NCBI) from Escherichia coli BW25113

 Score = 63.2 bits (152), Expect = 9e-15
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 12/242 (4%)

Query: 74  GNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGW 133
           G ++ +L       C+C + P+  G     V +G  L+F + +P++N A    +    GW
Sbjct: 111 GTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGW 170

Query: 134 QIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKELTQKERLKFAYDST 193
             A I +V+G+++     L+I  L     V+++V         ++    + +  F     
Sbjct: 171 GFAAIRLVAGLVMV----LLIATL-----VQKWVRETPQTQAPVEIDIPEAQGGFFSRWG 221

Query: 194 RDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGP-ENPLAVIFATIIAVPLYS-NALG 251
           R +    W  I + I +  ++ G A   +     G  +N L  + A  +A  L+      
Sbjct: 222 RALWTLFWSTIPVYI-LAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAA 280

Query: 252 TIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITG 311
            IPI + ++  G+G   ALA +M   A+S P  ++LRK    K + +   + +++ VI G
Sbjct: 281 EIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVG 340

Query: 312 YL 313
            L
Sbjct: 341 GL 342