Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 345 a.a., Predicted permeases from Enterobacter asburiae PDN3

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 18/243 (7%)

Query: 74  GNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGW 133
           G ++ ++       CSC + P+  G     V +G  L+F + +P++N A    +    GW
Sbjct: 111 GTLLGTIFSLPGMMCSCCAAPVAAGMRRQRVSMGGALAFWMGNPLLNPATLVFMGFVLGW 170

Query: 134 QIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKELTQKERLKFAYDST 193
             A I +V+G++  +V   ++ KL  +   E     +        ++++ +   FA    
Sbjct: 171 HFAFIRLVAGLLTVLVVATLVQKLVKDTAAEPAAVEL--------DVSEPQGGFFARWG- 221

Query: 194 RDIVKRVW----LYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPLY-SN 248
           R + +  W    +YIL  + +GA      P          +N L  + A  +A  L+   
Sbjct: 222 RALWQLFWSTIPVYILAVLALGAARVWLFPH----ANGAIDNTLMWVIAMAVAGCLFVIP 277

Query: 249 ALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIV 308
               IPI + ++  G+G   ALA ++   A+S P  ++LRK    K + +  G+ +++ V
Sbjct: 278 TAAEIPIVQTMMLAGMGTAPALALLITLPAISLPSLIMLRKSFPAKALWLTAGLVALSGV 337

Query: 309 ITG 311
           + G
Sbjct: 338 MVG 340



 Score = 40.4 bits (93), Expect = 6e-08
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 2/127 (1%)

Query: 186 LKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPL 245
           L+ A+D        VW   ++G+ +G++I    P   L K  G       +  TI ++P 
Sbjct: 63  LQAAWDYAMVYFLAVWKAAVLGVILGSLIQVLIPRNWLVKTLGQPRFQGTLLGTIFSLPG 122

Query: 246 YSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVI--KPKLIAVFFGIT 303
              +    P+A  +  + V +G ALAF M    L+    V +  V+      I +  G+ 
Sbjct: 123 MMCSCCAAPVAAGMRRQRVSMGGALAFWMGNPLLNPATLVFMGFVLGWHFAFIRLVAGLL 182

Query: 304 SIAIVIT 310
           ++ +V T
Sbjct: 183 TVLVVAT 189