Pairwise Alignments

Query, 318 a.a., permease from Methanococcus maripaludis S2

Subject, 406 a.a., Predicted permeases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 54/289 (18%), Positives = 117/289 (40%), Gaps = 19/289 (6%)

Query: 45  IMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGV 104
           I+ +++S     F  EK  +     +     ++ +  G ++  CS S++       + G 
Sbjct: 27  ILGYAVSSFIQIFVTEKRMQETMGDAKAKSILLGTFFGFISSSCSFSALATSKSLFQKGA 86

Query: 105 PLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVE 164
               +++FL+ S  +      ++    GWQ  +   V G+++ +   L+I  +     +E
Sbjct: 87  SFASSIAFLLASTNLVIELGIIISIFLGWQFVVGEYVGGILLILCSWLLIRLIKPNGLIE 146

Query: 165 EYVYSIRSRARKIKELTQ-KERLKFAYDSTRDIV------KRVWLYILIGIGIGAIIHGY 217
           +   ++ S + K  E +  KE+++   +  +         K VW  + +G  I  I+  +
Sbjct: 147 KARKNLDSSSDKQAESSSFKEKVQSKKNWAKVGKQYAMEWKMVWKDVTLGFTIAGIVSAF 206

Query: 218 APEE----VLAKYAGPENPLA-------VIFATIIAVPLYSNALGTIPIAEALIGKGVGI 266
            P+     +       +N          VI   + A   +  ++G IP+A  L GKGV  
Sbjct: 207 VPDSFFQTLFINTGEGQNTFGFFTLLEHVIVGPVAAFLTFIGSMGNIPLAALLFGKGVSF 266

Query: 267 GTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFN 315
              +AF+  +  + FP   +  K    K+      +   ++++T  L +
Sbjct: 267 AGVMAFIF-SDLIVFPVLRINAKYYGWKMSLFILFLLFTSLIVTALLLH 314