Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  145 bits (366), Expect = 1e-39
 Identities = 89/281 (31%), Positives = 158/281 (56%), Gaps = 9/281 (3%)

Query: 39  NIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFA 98
           +I + IR+PR +  +L GA LAL G   Q + +N LA P++LGVTSG+  GA I +L   
Sbjct: 59  HIVWLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVG 118

Query: 99  --YNPYLVQFSAFIFGVIAVYIAYKLSSLLKSGIVG---LILSGMAISAFFSAMIGLIKY 153
                  +  +AFI  ++++ +   ++S  ++G +    L+L G+A+S    A   L+ +
Sbjct: 119 EVIGLLTLPLAAFIGALLSMLVVLAVAS--RNGRLESDRLLLCGVAVSFVMMAAANLLLF 176

Query: 154 VADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKS 213
           + D +     ++FW+LG     RW  L +    +L+G+  L+ +    N L  G++ A +
Sbjct: 177 MGD-HRAASAVMFWMLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVT 235

Query: 214 LGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVG 273
           LG++++ ++     +A+L      S++G I +VG++ PHIAR LVG ++R+L+P    +G
Sbjct: 236 LGLNARNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLG 295

Query: 274 ATLLLLCDTLARTL-TPSEIPISIITSFIGAPILIIILSKR 313
           +  L+  D  ARTL  P ++PI + T+ IG    I ++ +R
Sbjct: 296 SLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRRR 336