Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  155 bits (393), Expect = 1e-42
 Identities = 95/318 (29%), Positives = 167/318 (52%), Gaps = 13/318 (4%)

Query: 1   LNKNYVFPFLFAGVFLFSLFVGRYMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLA 60
           + +  + P +   V    L+   Y+ DP       +   + ++ RL RA+  +  GA LA
Sbjct: 21  IGETAISPQVVLQVLANKLWAASYVLDP-------IDEGVVWNYRLTRALVAAACGAGLA 73

Query: 61  LAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFAYNPYLVQFSAFIF----GVIAV 116
             GV  Q++ +N LA P +LG+++G++ GA + +        L+  SA  F       A+
Sbjct: 74  TCGVILQSLLRNPLADPYLLGISAGASTGA-VLVALIGVGGGLISLSAGAFVGAMAAFAL 132

Query: 117 YIAYKLSSLLKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLR 176
            I    +S   SG   +IL+G+A S  F+A+   +   +   E+   I+FWLLG+  G+R
Sbjct: 133 VILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSASSEQARGILFWLLGNLSGVR 192

Query: 177 WVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLAASAS 236
           W  + ++V   + G+   +  +   +    G ++A SLG+  ++++ + +  A L  +  
Sbjct: 193 WPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGIPVRRVQFVLVGCAALVTAVM 252

Query: 237 TSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLARTLTPSE-IPIS 295
            S+ G I +VG+V PH  RLL+G  + +L+PASA  GA  L+  D L+RTL   + IP+ 
Sbjct: 253 VSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFLIAADVLSRTLIKGQVIPVG 312

Query: 296 IITSFIGAPILIIILSKR 313
           ++T+ +GAP+  +IL  R
Sbjct: 313 VVTALVGAPVFALILIGR 330