Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 322 a.a., iron-dicitrate transporter subunit FecD from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 2e-39
 Identities = 102/304 (33%), Positives = 164/304 (53%), Gaps = 11/304 (3%)

Query: 16  LFSLFVGRYMFDPSLIFTNSLANNIF-FDI---RLPRAIAVSLAGASLALAGVSFQNIFK 71
           L SL  G     P  +    LA++   FD+   RLPR++   LAG +  LAG   Q + +
Sbjct: 20  LISLSAGTVWLTPDAVLDRLLAHDALDFDVWNHRLPRSLIAILAGCAFGLAGAIVQGVIR 79

Query: 72  NYLAGPNILGVTSGSAFGASIAILFFAYNPYL-VQFSAFIFGVIAVYIAYKLSSLLKSGI 130
           N LA P ILGVT G+    ++AI+ + + P   +   A + G     +    ++ +    
Sbjct: 80  NPLASPEILGVTQGAGLALTVAIISWPHMPIAWLPLVACLGGAGGALLLALYNAGVSFSG 139

Query: 131 VGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIG 190
           V   LSG+AI+   S++   +  ++ P + + T +  L GS     W  + + V+P L+ 
Sbjct: 140 VRFALSGVAIAVTLSSVTEFL-ILSHPLD-INTALLALTGSLWSRNWHHVAL-VLPFLVL 196

Query: 191 I-IGLVMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVV 249
           I +GL + K   N++A GDE A SLG    + + + +  A +  S    + G I ++G+V
Sbjct: 197 IPVGLCLAK-PLNLIALGDEAAHSLGTALGRTRWLAMACAVVLTSLGVGVIGPIGFIGLV 255

Query: 250 SPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLARTL-TPSEIPISIITSFIGAPILII 308
           +PH+AR LVG  ++ L+PA+   GA LL+L DTL RTL  PSEIP  ++T+ IGAP  + 
Sbjct: 256 APHMARRLVGGHHQYLLPAAMLTGALLLVLADTLGRTLIAPSEIPAGVLTAVIGAPYFLW 315

Query: 309 ILSK 312
           +L++
Sbjct: 316 LLAR 319