Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 327 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  166 bits (419), Expect = 9e-46
 Identities = 96/297 (32%), Positives = 165/297 (55%), Gaps = 10/297 (3%)

Query: 25  MFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTS 84
           +F P  +  N+  + I +DIRLP A+   L G +L LAG   Q I  N LA P  LGV+S
Sbjct: 32  LFQPEKV--NAGIHVIVWDIRLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVSS 89

Query: 85  GSAFGASIAILFFAYNP-----YLVQFSAFIFGVIAVYIAYKLSSLLKSGIVGLILSGMA 139
            +AFGA++AI+     P     + +  +AFIF +++  +   ++        G++L G+A
Sbjct: 90  AAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALLLDGITRWTGVAASGVVLFGIA 149

Query: 140 ISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVMLKW 199
           +   F+A++ ++++VAD  + L  +VFW +GS V   W  LG+  +  +  +   +   W
Sbjct: 150 LVFTFNALVAIMQFVADE-DTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAW 208

Query: 200 VFNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVG 259
               L  G+E A S G+  ++L+ +++   +L ++ + +  G I ++G+V+PHIAR+L+G
Sbjct: 209 QLTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLG 268

Query: 260 VDNRKLVPASAFVGATLLLLCDTLARTLTPS-EIPISIITSFIGAP-ILIIILSKRG 314
            D+R  +P S  +G  +L L    A+   P   +P+ I+TS +G P  L I+L  RG
Sbjct: 269 EDHRFYLPGSVLIGGLVLSLASIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRG 325