Pairwise Alignments

Query, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 361 a.a., ABC transporter membrane spanning protein (iron) from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 2e-38
 Identities = 103/303 (33%), Positives = 162/303 (53%), Gaps = 21/303 (6%)

Query: 20  FVGRYMFDPSLIFTNSLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNI 79
           F   + +DP+     S  + I  D RLPR +   L GA+  ++G   Q I +N LA P I
Sbjct: 66  FYALFAYDPA-----SAEHIIIRDYRLPRTLLGLLCGAAFGVSGALIQAITRNPLADPGI 120

Query: 80  LGVTSGSAFGASIAIL---FFAYNPYLVQFSAFIFGVIAVYIAYKLSSLLKSGI--VGLI 134
           LGV +G+AF  ++A+    F A + YL  + AF+  V    I Y + S  + G     L+
Sbjct: 121 LGVNAGAAFFVTLAVGLLGFHAISSYL--WFAFLGAVAVTLIVYSVGSRGRDGASPARLV 178

Query: 135 LSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGL 194
           LSG+A+SA     IG    + DP      +  W +GS  G R +D+ ++V P +I   GL
Sbjct: 179 LSGVALSAVLGG-IGSAITLLDP-RTFDGLRVWSIGSLSG-RNMDVVLTVAPFII--FGL 233

Query: 195 VMLKWV---FNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSP 251
           V+   V    N +A GD+ +++LGV+  + + + +   TL A A+T+ AG I ++G++ P
Sbjct: 234 VLSLCVAPSLNAVALGDDPSRALGVNLVRTRILVVIAVTLLAGAATAAAGPIGFIGLMVP 293

Query: 252 HIARLLVGVDNRKLVPASAFVGATLLLLCDTLAR-TLTPSEIPISIITSFIGAPILIIIL 310
           H+ R L G D R+++  +      LLL  D   R  L   E+   I+T+FIGAP+LI++ 
Sbjct: 294 HVVRWLSGPDQRRIIAFTILCSPILLLTADIAGRLVLFSGELEAGIVTAFIGAPVLIVLA 353

Query: 311 SKR 313
            +R
Sbjct: 354 LRR 356