Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 388 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 37/267 (13%)

Query: 103 SDNVEEIKSLNPDVIFAP--SWGSQQGQYPQLKSLGIPVVFIDI-------ETASNYYKT 153
           S + E I +L PDV+     + G+      QL + GIPV+F D         TA      
Sbjct: 118 SISAEAIIALKPDVVVTTRNAEGANGELSAQLSAFGIPVLFSDSASSGGGRSTADGLPAL 177

Query: 154 IEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFL-VYDQRKNSYWTPG 212
           + M G +  +EA A++ + +      D     A+      PR ++L V     +  W  G
Sbjct: 178 MRMWGRLLGQEARAEDFLAF----VGDRFAAVAACVGKAPPRKVYLEVQSTYDDCCWAAG 233

Query: 213 GEFYQNNLITMAGGKTVSSDLPTGKAQINVEQAASWNPDVIITSAHTME-------YPST 265
            + +  +L+T+AGG+++ +       +++VEQ  +  PD+ I +             P  
Sbjct: 234 RQVW-GDLLTLAGGRSLDAATAPWFQKLHVEQLIAEQPDLYIATGGAFARGTRPPIAPGL 292

Query: 266 KVK------EDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYW---TAKTL 316
             +      E + T  G   + AVK+  V  +      W  L     L + +    A+ L
Sbjct: 293 SAREAQAGLEPLATRPGMDLVRAVKARRVSGI------WTGLVVIRPLNILFVERVARWL 346

Query: 317 HPDMYTDVDILNLTSSEYERFFNVSID 343
           HPD    +D          RF ++ ++
Sbjct: 347 HPDACRSIDPETTLRELNSRFLSIPVE 373