Pairwise Alignments

Query, 353 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 373 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 61/337 (18%)

Query: 35  VSVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGVMGADEFIDAVDPE- 93
           + V D +G    I S V+RV+   G     IYL    D     + V+G  + +   D + 
Sbjct: 23  IVVEDVSGRKVEIKSEVKRVILGEGRQ---IYLLAAFDTDAPFQRVVGWRDDLPKADYDG 79

Query: 94  ---FKTRSKDIK-----------SDNVEEIKSLNPDVIF----APSWGSQQGQYPQLKSL 135
              ++ +   IK           + NVE+  +L PD++     A +   +     +L  L
Sbjct: 80  YLAYEHKYPQIKQLPTFGGAKDGTFNVEQAVNLKPDLVLMNLEAKAATDEAKLIEKLSGL 139

Query: 136 GIPVVFIDIETA--SNYYKTIEMMGEVFQKEAYAQELIDYYNQSTNDVLKRTASISENEK 193
           GIPVVFID       N  K+I +MG++  K A A+E++ +  Q  + V +R  +  +  +
Sbjct: 140 GIPVVFIDFREKPFENAEKSIRIMGQLLGKPARAEEIVQFRRQQIDIVTERLKNY-QGPR 198

Query: 194 PRVLFLVYDQRKNSY-----WTPGGEFYQNNLITMAGGKTVSSDLPTGK-AQINVEQAAS 247
           P+V+      R   Y      + G E +   ++  AGG  ++  +  G    +N EQ  S
Sbjct: 199 PKVML----DRAGGYDEECCMSFGNENF-GKMVEAAGGINIAKGIIPGTFGTLNPEQIIS 253

Query: 248 WNPD-VIITSAHTMEY----------------PSTKVKEDVLTDEGWKEINAVKSGNVYA 290
             PD VI+T A+   Y                 + +  + ++    +K +    +G  +A
Sbjct: 254 ARPDVVIVTGANWKNYNTANGWVGVGPGADQQQALQRLQKLMERSAFKTLPVATNGKAHA 313

Query: 291 MPFDGESWDTL-GSKY-VLGLYWTAKTLHPDMYTDVD 325
           +      W     S Y  + +   AK LHPD++ D+D
Sbjct: 314 I------WHQFYDSPYQFVAIQVMAKWLHPDLFKDID 344