Pairwise Alignments

Query, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

Subject, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 3e-36
 Identities = 84/277 (30%), Positives = 149/277 (53%), Gaps = 13/277 (4%)

Query: 9   MIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGYPG 68
           M+ G +LL  G++  +  + R+A    V   +IG TIVAFG+S P++  S  A L+G   
Sbjct: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60

Query: 69  LAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVILGYN-GFSRF 127
           +AVG+ +GS I NI + LG+S L+ PL + ++ +  +  + ++A +L+  L  N   +  
Sbjct: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120

Query: 128 DGLILFLFMITYV-IYTIKTSESDDEEIISDLTTK---KASIFIVVGLLAVILGSDLFIE 183
           DGL+L + ++ Y+ +   +T  S     +  +       + + ++ GLL ++L   L + 
Sbjct: 121 DGLVLLVALVAYLGVLHYQTRHSRRPRTLDTVARAPWLSSVLLMLGGLLILVLAGHLLLG 180

Query: 184 GAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKRKLGSIVLGNVIGSNIANTCIA 243
            A  +A    + E +IG +L+  GTSLP LA+S+ AA R    I +GNVIGSN+ N    
Sbjct: 181 AAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGSNLFNLLGV 240

Query: 244 LSFSAMIVDIP--------KYNVELMVNTIMALLIIF 272
           L  +A++   P         +++ +M+  ++  L +F
Sbjct: 241 LGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVF 277