Pairwise Alignments

Query, 426 a.a., phosphomethylpyrimidine synthase from Methanococcus maripaludis S2

Subject, 622 a.a., Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  327 bits (839), Expect = 5e-94
 Identities = 186/461 (40%), Positives = 263/461 (57%), Gaps = 44/461 (9%)

Query: 1   MTQMTDAKSGITTEEMKFVAKEEG-------------------------------MDVET 29
           +TQM  A+ GI T EM++VA  E                                +  E 
Sbjct: 133 VTQMHYARRGIVTPEMEYVAVRENGQREWMAEYLGDAAREARLRGNPMGARIPEIITPEF 192

Query: 30  LKNLIAKGYVVIPKNVNR-NTKPVGIGDNLRTKVNVNLGTSPDFIDIACELKKVEISNKY 88
           +++ +A+G  +IP N+N    +P+ IG N   KVN N+G S     I  E+ K+  + ++
Sbjct: 193 VRDEVARGRAIIPANINHPEVEPMAIGRNFLVKVNANIGNSAVTSSIEEEVDKLVWAIRW 252

Query: 89  GADAIMDLSTGGNLPEIRKEIIKNTNLPIGTVPIYEVGVDAKEKYGRVI-DMDEDLIFNV 147
           GAD +MDLSTG N+   R  I++N+ +PIGTVPIY+    A EK G V  D+   +  + 
Sbjct: 253 GADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQ----ALEKVGGVAEDLTWAIYRDT 308

Query: 148 IERQAKEGVDFMTLHCGITKQTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLYKEF 207
           +  QA++GVD+ T+H G+    +    N  R+ G+VSRGG+ +  + + H +E+ LY  F
Sbjct: 309 LIEQAEQGVDYFTIHAGVRLPFIHLTAN--RRTGIVSRGGSIMAKWCITHHQESFLYTHF 366

Query: 208 DYLLELLKEHDVTLSLGDGMRPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVEGPG 267
           D + E++K +DV+ SLGDG+RPG   D  D AQ  EL TLGEL     +  VQ M+EGPG
Sbjct: 367 DEICEIMKAYDVSFSLGDGLRPGSASDANDEAQFAELRTLGELTQTAWKHDVQTMIEGPG 426

Query: 268 HVPYNNIEANMKIQKTLCKNAPFYVLGPIVTDLAPGYDHITAAIGGTLAAVSGANFLCYV 327
           HVP + I+ANM  Q   C  APFY LGP+  D+APGYDHI +AIG  +    G   LCYV
Sbjct: 427 HVPMHLIQANMDEQLKRCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAMLCYV 486

Query: 328 TPAEHVRLMKEDDVKEGLIASKIAAQAADVAKGHPVAWKLEKEMADARIKHDWERQFEIA 387
           TP EH+ L   DDVK+GLIA KIAA AAD+AKGHP A   +  M+ AR +  W  QF + 
Sbjct: 487 TPKEHLGLPDRDDVKQGLIAYKIAAHAADIAKGHPGARARDDAMSKARFEFRWHDQFNLG 546

Query: 388 LDSNKPRKMREEI----PSKDEKACSVCG-DYCALLMVEEL 423
           LD +  R   +E      SK+   CS+CG  +C++ + +++
Sbjct: 547 LDPDTARDFHDETLPKDSSKEAHFCSMCGPKFCSMKITQDV 587