Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 652 a.a., ATP-dependent zinc metalloprotease FtsH from Rhodanobacter sp000427505 FW510-R12

 Score =  210 bits (534), Expect = 2e-58
 Identities = 108/247 (43%), Positives = 162/247 (65%), Gaps = 4/247 (1%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           + +SDV G ++ K+++ E VE+ +++   F+++G + P+GVL+ GPPGTGKTLLAKA+A 
Sbjct: 158 VNFSDVAGCDEAKEEVGELVEF-LRDPGRFQKLGGKIPRGVLMVGPPGTGKTLLAKAIAG 216

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E++  F S+ G +    +VG     +R++F +A++ AP +IF DEID+V   RG   G  
Sbjct: 217 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGG 276

Query: 624 -GVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQLL E+DG E  + V++IAATNRPD+LD ALLRPGR DR V+V +P+   R
Sbjct: 277 HDEREQTLNQLLVEMDGFEGTEGVIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR 336

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRHF 742
            +I KVH + +PI  DV+   +A+ T G++GAD+  +  EAA+ A RE  N+  V   H 
Sbjct: 337 EQILKVHMRKVPIASDVDAMTIARGTPGFSGADLANLVNEAALFAARE--NAREVRMSHL 394

Query: 743 DGAFKRI 749
           D A  +I
Sbjct: 395 DKARDKI 401



 Score =  177 bits (450), Expect = 1e-48
 Identities = 89/198 (44%), Positives = 131/198 (66%), Gaps = 4/198 (2%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           V + D+ G  E  +++ E+VE  +R P  F KLG + P+GVL+ GPPGTGKTLLAKA+A 
Sbjct: 158 VNFSDVAGCDEAKEEVGELVEF-LRDPGRFQKLGGKIPRGVLMVGPPGTGKTLLAKAIAG 216

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG-- 291
           EA   F++I+G + +  +VG     +R +FE+A++++P IIFIDEIDAV   R    G  
Sbjct: 217 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGG 276

Query: 292 -EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            +   + + QLL  MDG E    ++++AATNRPD +D AL RPGR DR++ +G+PD  GR
Sbjct: 277 HDEREQTLNQLLVEMDGFEGTEGVIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR 336

Query: 351 NEILQIHTRNMPLQPDYE 368
            +IL++H R +P+  D +
Sbjct: 337 EQILKVHMRKVPIASDVD 354