Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 648 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Sphingobium sp. HT1-2

 Score =  199 bits (507), Expect = 3e-55
 Identities = 99/227 (43%), Positives = 151/227 (66%), Gaps = 2/227 (0%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           + + DV G+++ +++L+E VE+ +K+   F R+G + PKG LL G PGTGKTLLA+A+A 
Sbjct: 161 VTFDDVAGIDEAREELQEIVEF-LKDPSKFARLGGKIPKGALLVGSPGTGKTLLARAIAG 219

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E+   F ++ G +    +VG     +R++F +A++ AP ++F DEID+V   RG   G+ 
Sbjct: 220 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGLGNG 279

Query: 624 G-VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQLL E+DG E  + ++I+AATNRPD+LD ALLRPGR DR V+VP P+   R
Sbjct: 280 NDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVVVPRPDIEGR 339

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALR 729
            +I  VH K +P+  DVN   +A+ T G++GAD+  +  EAA++A R
Sbjct: 340 EKILAVHMKKVPLAPDVNPRTIARGTPGFSGADLANLVNEAALMAAR 386



 Score =  179 bits (454), Expect = 4e-49
 Identities = 92/205 (44%), Positives = 135/205 (65%), Gaps = 4/205 (1%)

Query: 165 ELKETKVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGK 224
           +L   K   VT++D+ G+ E  ++++E+VE  ++ P  F +LG + PKG LL G PGTGK
Sbjct: 152 KLLTEKHGKVTFDDVAGIDEAREELQEIVEF-LKDPSKFARLGGKIPKGALLVGSPGTGK 210

Query: 225 TLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAP 284
           TLLA+A+A EAG  F+TI+G + +  +VG     +R +FE+A++N+P I+FIDEIDAV  
Sbjct: 211 TLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGR 270

Query: 285 KRDEASG---EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREIT 341
            R    G   +   + + QLL  MDG E+   ++I+AATNRPD +D AL RPGR DR++ 
Sbjct: 271 HRGAGLGNGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVV 330

Query: 342 IGIPDRHGRNEILQIHTRNMPLQPD 366
           +  PD  GR +IL +H + +PL PD
Sbjct: 331 VPRPDIEGREKILAVHMKKVPLAPD 355