Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 707 a.a., peptidase M41 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  210 bits (535), Expect = 2e-58
 Identities = 113/248 (45%), Positives = 156/248 (62%), Gaps = 5/248 (2%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           I + DV GLE+ K++++E VE+ +KN   F  +G + PKG LL GPPGTGKTLLAKAVA 
Sbjct: 199 ITFKDVAGLEEAKEEVQEIVEF-LKNPSKFTILGGKIPKGALLVGPPGTGKTLLAKAVAG 257

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAP--KRGMDFG 621
           E++  F S+ G +    +VG     +R++F++A+  AP +IF DEID++     RG   G
Sbjct: 258 EADVPFFSLSGSDFVEMFVGVGAARVRDLFKQAKAKAPCIIFIDEIDAIGRHRSRGATPG 317

Query: 622 SSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETA 681
            +   E  +N LL E+DG      V+I+AATNRPD LD ALLRPGR DR V +  P+   
Sbjct: 318 GNDERENTLNSLLVEMDGFATDSGVIILAATNRPDTLDSALLRPGRFDRQVSIDKPDING 377

Query: 682 RLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRH 741
           R EIF VH K + +  DV+  KLA +T G+ GA+I  VC EAA+IA R   N + V+ + 
Sbjct: 378 RTEIFAVHLKPLTLAADVDARKLAAQTPGFAGAEIANVCNEAALIAARR--NKKAVDQQD 435

Query: 742 FDGAFKRI 749
           F+ A  R+
Sbjct: 436 FNDAVDRV 443



 Score =  168 bits (425), Expect = 1e-45
 Identities = 91/205 (44%), Positives = 133/205 (64%), Gaps = 6/205 (2%)

Query: 168 ETKVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLL 227
           E KV  +T++D+ GL+E  ++++E+VE  ++ P  F  LG + PKG LL GPPGTGKTLL
Sbjct: 194 ENKV-KITFKDVAGLEEAKEEVQEIVEF-LKNPSKFTILGGKIPKGALLVGPPGTGKTLL 251

Query: 228 AKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRD 287
           AKAVA EA   F++++G + +  +VG     +R +F++A+  +P IIFIDEIDA+   R 
Sbjct: 252 AKAVAGEADVPFFSLSGSDFVEMFVGVGAARVRDLFKQAKAKAPCIIFIDEIDAIGRHRS 311

Query: 288 EAS---GEVER-RMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIG 343
             +   G  ER   +  LL  MDG  +   ++ILAATNRPD++D AL RPGR DR+++I 
Sbjct: 312 RGATPGGNDERENTLNSLLVEMDGFATDSGVIILAATNRPDTLDSALLRPGRFDRQVSID 371

Query: 344 IPDRHGRNEILQIHTRNMPLQPDYE 368
            PD +GR EI  +H + + L  D +
Sbjct: 372 KPDINGRTEIFAVHLKPLTLAADVD 396