Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 631 a.a., ATP-dependent zinc metalloprotease FtsH from Acinetobacter radioresistens SK82

 Score =  197 bits (501), Expect = 1e-54
 Identities = 111/284 (39%), Positives = 176/284 (61%), Gaps = 8/284 (2%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           + ++DV G ++ KQ++ E V++ +K+   F+R+G   PKGVL+ GPPGTGKTLLAKA+A 
Sbjct: 154 VTFADVAGCDEAKQEVVEIVDF-LKDPAKFKRLGATIPKGVLMVGPPGTGKTLLAKAIAG 212

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E++  F S+ G +    +VG     +R++F +A++ AP +IF DEID+V   RG   G  
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGG 272

Query: 624 -GVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQ+L E+DG E  + +++IAATNR D+LD+ALLRPGR DR V+V +P+   R
Sbjct: 273 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRADVLDKALLRPGRFDRQVMVGLPDIKGR 332

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRHF 742
            +I  VH + +P    V+++ LA+ T G++GA +  +  EAA+ A R N N+  V+   F
Sbjct: 333 EQILNVHLRKLPSTTGVDVKVLARGTPGFSGAQLANLVNEAALFAARRNKNT--VDMHDF 390

Query: 743 DGAFKRI--APSVKDDDMDEYKDLAKEYGQ--NAGVSEIEKGPE 782
           + A  ++   P  K   + E +  A  Y +  +A V+E+  G +
Sbjct: 391 EDAKDKLYMGPERKSMVLREEERRATAYHEAGHAIVAEMLPGTD 434



 Score =  171 bits (434), Expect = 9e-47
 Identities = 85/192 (44%), Positives = 126/192 (65%), Gaps = 4/192 (2%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           VT+ D+ G  E  +++ E+V+  ++ P  F +LG   PKGVL+ GPPGTGKTLLAKA+A 
Sbjct: 154 VTFADVAGCDEAKQEVVEIVDF-LKDPAKFKRLGATIPKGVLMVGPPGTGKTLLAKAIAG 212

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG-- 291
           EA   F++I+G + +  +VG     +R +FE+A+ ++P IIFIDEIDAV   R   +G  
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGG 272

Query: 292 -EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            +   + + Q+L  MDG E    ++++AATNR D +D AL RPGR DR++ +G+PD  GR
Sbjct: 273 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRADVLDKALLRPGRFDRQVMVGLPDIKGR 332

Query: 351 NEILQIHTRNMP 362
            +IL +H R +P
Sbjct: 333 EQILNVHLRKLP 344