Pairwise Alignments

Query, 322 a.a., daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

 Score =  152 bits (384), Expect = 3e-41
 Identities = 79/220 (35%), Positives = 128/220 (58%), Gaps = 1/220 (0%)

Query: 3   AIEVKNLVKKFDTNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVI 62
           AIE  +L ++F   VAV++VSF + +GEIF FLG NG GK+TT+ +LT LL AT G+A +
Sbjct: 276 AIEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDATDGTASL 335

Query: 63  SGFDASKDPKKVRKTIGIVFQDSTLDNQLTAYENLYIHGKIYGYKGEILKNRIDELLDFV 122
            G   +    + R  +G + Q  +L  +L+  +NL +H ++Y    +     +   L   
Sbjct: 336 FGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELVSAALAQF 395

Query: 123 ELLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIKKMQA 182
           EL    D +      G+ +RL++A + +H PEIL LDEPT G+DP  R   W ++ ++  
Sbjct: 396 ELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDEPTSGVDPAARDMFWRHLIRLSR 455

Query: 183 KNNMTIFLTTHYMEEAELLADKVAIIDNGKIIAEGTVNEL 222
              +TIF++TH+M EAE   D+++++  G+++  G   EL
Sbjct: 456 DEGVTIFVSTHFMNEAE-RCDRISLMHRGRVLTVGAPTEL 494



 Score =  143 bits (361), Expect = 1e-38
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 6/238 (2%)

Query: 3   AIEVKNLVKKFDTNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVI 62
           AI +++L  ++   +A+N VS S+ KG+  A +GP+G GKST + +++ + K  +G   +
Sbjct: 12  AIRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSV 71

Query: 63  SGFDASKDPKKVRKTIGIVFQDSTLDNQL----TAYENLYIHGKIYGYKGEILKNRIDEL 118
            GFD ++  K+      + +    L   L    +  EN+   G+++G      +  +  L
Sbjct: 72  LGFDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMRRL 131

Query: 119 LDFVELLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIK 178
           LD   L  F D+     SGGM ++L +  SL+H+P++L LDEPT G+DP +R   WE + 
Sbjct: 132 LDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWELVD 191

Query: 179 KMQAKN-NMTIFLTTHYMEEAELLADKVAIIDNGKIIAEGTVNELKKIVGNDCISVKF 235
            M A+  +MT+ ++T YMEEAE     VA +D+GK+IA+G   E+ +  G D +   +
Sbjct: 192 AMCAERPDMTVLVSTAYMEEAERFGHLVA-MDDGKVIAQGDTREIMRDAGADTLEAAY 248