Pairwise Alignments

Query, 322 a.a., daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 578 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  172 bits (437), Expect = 1e-47
 Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 2/226 (0%)

Query: 4   IEVKNLVKKFDTNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVIS 63
           IE K L KKF    A ++V+F+V +GEIF  LGPNGAGKSTT  ++  LL  TSG A++ 
Sbjct: 330 IEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVL 389

Query: 64  GFDASKDPKKVRKTIGIVFQDSTLDNQLTAYENLYIHGKIYGYKGEILKNRIDELLDFVE 123
           G D  +   K R+ +G + Q  +L   LT  +NL     +YG +G     +I  + +   
Sbjct: 390 GMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFG 449

Query: 124 LLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIKKMQAK 183
           L             G  +RL +A SL+HEP+ILFLDEPT G+DP TR   W +I  M  K
Sbjct: 450 LKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEK 509

Query: 184 NNMTIFLTTHYMEEAELLADKVAIIDNGKIIAEGTVNELKKIVGND 229
             +T+ +TTH+M+EAE   D++ ++  GK+IA GT ++LK    ND
Sbjct: 510 -GVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAND 553



 Score =  133 bits (335), Expect = 9e-36
 Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 8/308 (2%)

Query: 4   IEVKNLVKKFD--TNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAV 61
           I +  L K+F      AV  +  +++ G +   +GP+GAGK+T + +L  LLK  SGSA 
Sbjct: 6   ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSAT 65

Query: 62  ISGFDASKDPKKVRKTIGIVFQDSTLDNQLTAYENLYIHGKIYGYKGEILKNRIDELLDF 121
           + GFD  K+   +   +G + Q   L   LT  ENL ++  +    GE  K     LL+F
Sbjct: 66  VIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEF 125

Query: 122 VELLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTIGLDPQTRSHIWEYIKKMQ 181
             L  F  ++    SGGM ++L +A +L+ EP++L LDEP +G+DP +R  +W+ + ++ 
Sbjct: 126 TSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHEL- 184

Query: 182 AKNNMTIFLTTHYMEEAELLADKVAIIDNGKIIAEGTVNEL-KKIVGNDCISVKFEEIPK 240
           A   M I  +T Y++EAE   D V +++ G+++ +G    L + + G   +     E  +
Sbjct: 185 AGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNR 243

Query: 241 NLSFENCELKENGKVIYYTENADLKIPKIF---EFAHENGLKIQEISYKKPNLNDVFIKL 297
            L     +L +    +   ++  L + K     +  H +G+    I+   P   D FI L
Sbjct: 244 KLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDL 303

Query: 298 TGREIRSE 305
            G    SE
Sbjct: 304 LGGAGTSE 311