Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

 Score =  103 bits (257), Expect = 1e-26
 Identities = 103/448 (22%), Positives = 203/448 (45%), Gaps = 40/448 (8%)

Query: 24  PMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIGGSSAISRR 82
           PMV++   QS    ++ I+V   LG+ ALAA+   FP +F  +A+  G+G G S  I + 
Sbjct: 19  PMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFIALVIGLGAGASVLIGQA 78

Query: 83  IGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFS--LIGASGITVTM---AVEYS 137
            G         I   ++ LG ++G+    V   LG++F+   + A G  V +   AV Y+
Sbjct: 79  WGAQETAMVKAITGATLTLGALVGV----VAAVLGSLFARPALQALGTPVDVLDDAVGYA 134

Query: 138 TILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMGVA 193
             +     +LL   +   +LRG  DT   + A+++ +++ ++L P  I     +  MG+ 
Sbjct: 135 QKMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPALIRGWVGLPPMGIQ 194

Query: 194 GAAWATLLSLVITGILFVYWLFIKKDTFL--KISFEKFKLDINIIKEIFSIGLPASISHL 251
            A +A L+   +  +  +  L  K       +      +LD  I+ ++  IGLP  +  +
Sbjct: 195 SAVYAGLVGNALAMLFLILRLRHKNHVMAPDRELLAALRLDRVILGKVLRIGLPTGLQMV 254

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPE 311
            ++ S  ++ A+V    G+   A +    +IV+    P + +A   +++   A G+   E
Sbjct: 255 VLSLSELVILALV-NGHGSQATAAYGAVTQIVNYVQFPALSIAITASILGAQAIGAGRLE 313

Query: 312 KLEISYKYALKMGILVETIIAALILIFENQITY----LFTYSENSVHILEGLLVFLKYMF 367
           ++       L+ G+L+ T +   +++    +++    LF   + +    E LL  + +  
Sbjct: 314 RI----GPILRTGLLINTCLTGGLIVLGYVLSHWLLGLFITDDAARVNAEHLLHIMLWSI 369

Query: 368 LFYPTLPLGMLTAAMFQGVSKGNN----SLFISLLRTIILQIPMAYTFGIIFNQGLTGVW 423
           L +          A+  G+ + +      + IS+   + +++PMAY     F  GL GVW
Sbjct: 370 LVFG-------FQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLLNAHF--GLEGVW 420

Query: 424 FGMILGH--VIAVSIAYLLGIYTIRQFK 449
               + +  ++A+  AY   ++  +Q K
Sbjct: 421 MAFPVTYLAMLALQTAYYRLVWRHKQIK 448