Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  100 bits (250), Expect = 8e-26
 Identities = 89/431 (20%), Positives = 186/431 (43%), Gaps = 29/431 (6%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           + ++ ++LP++I     +  + +DA+    +    LAA+GL       +  +  G  +  
Sbjct: 19  RGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLLAT 78

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVTMAVE 135
           +  +++R G         +   S+ L +++GI    ++     I  ++      +  ++ 
Sbjct: 79  TPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDLIEPSMG 138

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMG 191
           Y   +  G   +    +      G G T+ +M   + G  LNI L+ IFIY    V  MG
Sbjct: 139 YLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVPAMG 198

Query: 192 VAGAAWATLLSLVITGILFVYWL-----FIKKDTFLKISFEKFKLDINIIKEIFSIGLPA 246
             G  WAT +++ +  +    W      +   + + +  + ++     +IK + SIGLP 
Sbjct: 199 GVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWA----VIKRVLSIGLPI 254

Query: 247 SISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYG 306
            I+    + S+F + A++  + G   ++       + S+  +    L+  VTV  G A G
Sbjct: 255 GIAIFAES-SIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQALG 313

Query: 307 SANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYM 366
              P +   +    +   +    +  +L+L+F  QI  ++T     +H+   L+VF   +
Sbjct: 314 RGEPREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLASMLIVF-SAL 372

Query: 367 FLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTII----LQIPMAYTFGII----FNQG 418
           F F  ++    +TAA   G  +G     ++++ T+     + +P+ Y  G+        G
Sbjct: 373 FQFSDSI---QVTAA---GALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGEPSG 426

Query: 419 LTGVWFGMILG 429
            +G+W G+I+G
Sbjct: 427 PSGLWQGLIVG 437