Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 203 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

 Score = 63.5 bits (153), Expect = 6e-15
 Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMG 191
           Y+  + G   V++   + NAILRG GD   +M  + L + LNIVL P+ I+       +G
Sbjct: 10  YTQWMLGSNAVIMLLFVINAILRGAGDAAISMRVLWLSNGLNIVLCPLLIFGPGPFPALG 69

Query: 192 VAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHL 251
           + GAA AT +    TG+L+  W   +  T ++++  +      ++  I    L   I  +
Sbjct: 70  IEGAAIATCIGRG-TGVLYQLWALFRGGTHIRVTMAQLAWRGAMLWNIVRTSL-GGIGQM 127

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPE 311
            +A + ++    +    G++ +A  +   RI+    +P  G++     + G   G+ + +
Sbjct: 128 IVAMTAWIFLMRILATIGSEAVAGATIAIRIMMFTMMPAWGMSNAAATLVGQNLGAGHAD 187

Query: 312 KLEI 315
           +  +
Sbjct: 188 RAAV 191