Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 484 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score = 87.4 bits (215), Expect = 9e-22
 Identities = 93/428 (21%), Positives = 179/428 (41%), Gaps = 16/428 (3%)

Query: 36  NVIDAIWVAGLGS-DALAAIGLFFPFMFAIMAISNGVGIGGSSAISRRIGQNNKDAADNI 94
           ++I+  +++ LG  +  AA+G      F   ++  G+ IG ++ +SR +G    D A  I
Sbjct: 42  DLINLFYISLLGEKETAAAVGFAGVVGFFHASLCIGLTIGIAAVVSRTVGAGRMDDARRI 101

Query: 95  AVHSIVLGIIIGILL-IGVIPFLGAIFSLIGASGITVTMAVEYSTILFGGAVVLLFTNIA 153
              S+VL + + +L   G   FL      +GA G T  +A  Y ++      +L      
Sbjct: 102 GTSSLVLMVALSVLAGTGTAFFLHPALQALGAQGETARLAHRYLSVTVHTLPLLGIGMAT 161

Query: 154 NAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVAGAAWATLLSLVITGILFVYW 213
           +A+LR  GD +R+M   + G+ +  VLDPI I+   +G+ GAA + ++S      L ++ 
Sbjct: 162 SALLRSVGDARRSMTVTLAGAFVTAVLDPILIFGFGLGLDGAAISAVVSRTALAALGLHG 221

Query: 214 LFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGI 273
           + +K          +   D    + + S+  PA +++L        +T  VA+ G +  +
Sbjct: 222 VLVKHRMLGPFQASRLGAD---ARALGSVAGPAVLTNLATPVGAAFVTHAVAQFGPS-AV 277

Query: 274 AVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEKLEISYKYALKMGILVETIIAA 333
           A  +T  R+  +    +  L+  V  +     G+    +++   + +L   +    +   
Sbjct: 278 AGAATIDRLTPVAFGLVYALSGAVGPILAQNLGAGQYRRVQEGLRASLLFMVASVAVAWL 337

Query: 334 LILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSL 393
           L+ + +  +   F+    +  ++     +L   F F   L    +  A F  +     S 
Sbjct: 338 LLALGQGLLVRAFSAEGQAAELISLFCSWLAASFFFAGGL---FVANASFNNLGHPLLST 394

Query: 394 FISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGH----VIAVSIAYLLGIYTIRQFK 449
             +  R  +  IP A+      + G  GV  G  +G     ++AV +A+ L     RQ  
Sbjct: 395 GFNWGRATLGTIPFAWWGS---HYGAAGVLIGQAVGSSIFGLLAVVVAFRLAAKLARQEA 451

Query: 450 TTLTPETV 457
               P  V
Sbjct: 452 PDAAPAPV 459