Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 473 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  122 bits (306), Expect = 3e-32
 Identities = 119/436 (27%), Positives = 211/436 (48%), Gaps = 28/436 (6%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG-S 76
           +++++ P V+ M  Q+   +I+  +V  LG+DALA + L FP +  +   S+G   GG +
Sbjct: 26  LLRLAAPNVLVMVAQASVGLIETYFVGKLGTDALAGMALVFPIVMLMQMTSSGAMGGGIA 85

Query: 77  SAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGA-IFSLIGASGITVTMAVE 135
           S+I+R +G   +  AD +  H+IV+ +  G+     +   G  ++ ++G +G  +  A+ 
Sbjct: 86  SSIARALGARRRADADALVWHAIVIALGFGLCFTLALLLGGRWLYGIMGGTGPALEAALT 145

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL----NMG 191
           YS  +F GAV++   N  +AI+RG G+        ++G V  I   P+ I+ +     MG
Sbjct: 146 YSHWVFSGAVLVWLFNSLSAIIRGTGNMSVPANVTVVGVVFLIPASPLLIFGIGPLPGMG 205

Query: 192 VAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHL 251
           +AG A A LL  ++  I  + +L   + + L+ +    KL   + ++I  IGL  ++S +
Sbjct: 206 IAGGAMALLLYYLLGSIALIVYLRSPR-SLLRPTLAALKLRWPLFRDILRIGLVGAVSTV 264

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLV-GLATGVTVVTGAAYGSANP 310
               S+ + TA+     G+  +A + T  R+  +  +PLV GL   +  + G   G+   
Sbjct: 265 ATNLSIGIATALTGHF-GSGALAGYGTASRLEYL-LVPLVFGLGAPLVAMVGTCMGAGQR 322

Query: 311 EK-LEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLF 369
           E+ L  ++  A     L ETI  A  L F      LF    N   +LE    +L+ +   
Sbjct: 323 ERALRATWAGAALAFALTETIGLAAAL-FPRPWLLLF---GNDPAMLETGAHYLRVVGPL 378

Query: 370 YPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFG---IIFNQGLTGVWFG- 425
           Y    +G++     QG  +    L   +L   I ++ +A T G   + +  GLTGV+   
Sbjct: 379 YGFFGVGLVLYFASQGAGR----LLWPVLGN-IARLAVAGTGGWLALRWGGGLTGVFAAQ 433

Query: 426 ----MILGHVIAVSIA 437
               ++ G VIA +IA
Sbjct: 434 GVALVVYGIVIASAIA 449