Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 4e-35
 Identities = 104/438 (23%), Positives = 205/438 (46%), Gaps = 26/438 (5%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIG 74
           K  +    PM+++   QSL   ++ I+V   LG  ALAA+  FFP MF  +A   G+G G
Sbjct: 32  KVFLLFLAPMLLSNILQSLSGTLNNIYVGQMLGVGALAAVSSFFPVMFFFIAFIIGLGAG 91

Query: 75  GSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVI--PFLGAIFSLIGASGITVTM 132
            S  I +  G  +   A  +A  ++ +G++ G L+I V    F   + + +G     +  
Sbjct: 92  ASVLIGQAWGARDAAKAKAVAGTTLTVGVLTG-LVIAVFGGAFTTPMLASLGTPPDVLAD 150

Query: 133 AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VL 188
           +  Y+ I+      L    +A A+LRG GDT   +  +++ +++ +V+ P  I     + 
Sbjct: 151 STRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIRGWGGLP 210

Query: 189 NMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKIS--FEKFKLDINIIKEIFSIGLPA 246
            +GVA  AWA++LS  +  I   + L  +K      +      ++   ++K +  IG+P 
Sbjct: 211 QLGVASGAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLLKAVLKIGVPT 270

Query: 247 SISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYG 306
            +  + +A +  +L ++V  + G+   A +    ++V+    P + +A   +++   A G
Sbjct: 271 GVQMIVVALAEVVLLSMV-NSYGSSATAAYGAVNQVVAYVQFPAISIAITASILGAQAIG 329

Query: 307 SANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYM 366
           +    +L    K AL M +++   +  L  +F   +   F  SE  + I + LL  + + 
Sbjct: 330 AGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFITSEPVLEIAQTLLHIMLWS 389

Query: 367 FLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTII----LQIPMAYTFGIIFNQGLTGV 422
            + +     GM  A+   G+ + + S+ +  L +I+    +++P+AY        GL G+
Sbjct: 390 LVIF-----GM--ASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMS--HRLGLDGI 440

Query: 423 W--FGMILGHVIAVSIAY 438
           W  + +  G ++ +  AY
Sbjct: 441 WIAYPVTFGAMLLLQTAY 458