Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 94/450 (20%), Positives = 200/450 (44%), Gaps = 24/450 (5%)

Query: 5   KGVQNLLGDP-KKAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMF 62
           +G ++L   P    ++  ++P + +   QSL   I+AIWV   LG  ALAA       MF
Sbjct: 6   QGARDLTQGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMF 65

Query: 63  AIMAISNGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLG--AIF 120
            + ++  G G+  +  I++ +G  + DAA   A  S V    +  + + V  + G  A+ 
Sbjct: 66  LMFSVVFGFGMASTVMIAQAVGARDMDAARR-AFGSAVGFCFLLAMGVAVAGWFGGPALL 124

Query: 121 SLIGASGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVL 180
            L+        MA+ Y  ++F      L + +    LRG GD +  +  +IL   +++VL
Sbjct: 125 HLLATPPEAFDMALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVL 184

Query: 181 DPIFIYVLN----MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKI---SFEKFKLDI 233
           +P+ I  L     MG+ G+A AT  +  ++ I  V + +  KD  L++        +  +
Sbjct: 185 NPVLILGLGPIPAMGIGGSAAATAAAGFVSLIALVIYTY-AKDLPLRLRGAELGYLRPAM 243

Query: 234 NIIKEIFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGL 293
           + ++ + + GLP  +  + M+ S  ++  +V + G     A +    +I +   +P + +
Sbjct: 244 DEMRVLSTKGLPMGLQMIVMSTSGLVMIGLVNREGFL-VTAAYGAAQQIWTYLQMPAMAM 302

Query: 294 ATGVTVVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLF-TYSENS 352
              V+ +     G+   +++     Y +   + +   +  +ILIF   +  LF ++++  
Sbjct: 303 GAAVSAMAAQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQAV 362

Query: 353 VHILEGLLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTI--ILQIPMAYT 410
           +     + +   + F+ +        T  +F GV + N  +   LL  +  +  + + + 
Sbjct: 363 IDAAWNMQLLASWSFMLFG------CTMILF-GVMRANGVVVAPLLILVFTLFAVRLGFY 415

Query: 411 FGIIFNQGLTGVWFGMILGHVIAVSIAYLL 440
           +      G   +W    +G  +++++A L+
Sbjct: 416 YLAYPRIGADALWLSFPVGSAVSLTLAALV 445