Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., Na+ driven multidrug efflux pump from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (281), Expect = 2e-29
 Identities = 104/447 (23%), Positives = 207/447 (46%), Gaps = 36/447 (8%)

Query: 23  LPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIGGSSAISR 81
           +PMV++   Q L   ++ I++   LG+ ALAA+   FP +F  +++  G+G G S  I +
Sbjct: 18  VPMVLSNILQGLSGTLNGIFIGQMLGTHALAAVSGMFPIVFFFISLVIGIGAGASVLIGQ 77

Query: 82  RIGQNNKDAADNIAVHSIVLGIIIGIL--LIGVIPFLGAIFSLIGASGITVTMAVEYSTI 139
             G         IA  ++VLG +IG++  ++GV+ F       +G     +  AV Y+ +
Sbjct: 78  AWGAREPHKVKAIAGTALVLGALIGLVAAVLGVV-FARPALQALGTPVDVLDDAVAYARV 136

Query: 140 LFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMGVAGA 195
           +     +LL   +   +LRG  DT   + A++L + L ++L P  I     +  +G+  A
Sbjct: 137 MLLIMPLLLVFILFTQLLRGVSDTVSPLIALLLSTALGLLLTPALIQGWLGLPRLGIQSA 196

Query: 196 AWATLLSLVITGILFVYWLFIKKDTFLKISFE---KFKLDINIIKEIFSIGLPASISHLT 252
           A+A L+S     + F+ W   +K   L +  E     +LD +I+ ++  IG+P  +  + 
Sbjct: 197 AYAGLVSYA-AALGFLAWRLGRKHHVLAVDRELIGALRLDRDILAKVMRIGIPTGLQMVV 255

Query: 253 MAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEK 312
           ++ S  ++ A+V    G+   A +    ++V+    P + +A   +++   + G+   ++
Sbjct: 256 ISVSELVILALV-NGHGSQATAAYGAVTQVVNYVQFPALSIAITASILAAQSIGAGRVDR 314

Query: 313 LEISYKYALKMGILVETIIAALILIFENQITYLF-------TYSENSVHI-LEGLLVFLK 364
           L    +  L +  ++   +  L     +++  LF         +E+ +HI L  +LVF  
Sbjct: 315 LGAILRTGLWLNAVLTGALVLLGYALSHKLMGLFLTQPEVRAQAEHLLHIMLWSILVF-- 372

Query: 365 YMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWF 424
                +  +  G++ A+    V      + IS+   + +Q+P AY        GL GVW 
Sbjct: 373 ----GFQAVVGGLMRASGVVMV-----PMAISVFCILAIQLPAAYVLDA--KMGLPGVWV 421

Query: 425 GMILGHV--IAVSIAYLLGIYTIRQFK 449
              + +V  + +  AY   ++  R+ +
Sbjct: 422 AFPVAYVAMLVMQTAYYRLVWRHRKIE 448