Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 457 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 97/452 (21%), Positives = 185/452 (40%), Gaps = 34/452 (7%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           + ++ +++P+++A   Q+    +D +   G  +  +AA+ +        +   +G+ +  
Sbjct: 9   RQLLALAIPVILAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLAL 68

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIF-SLIGASGITVTMAV 134
           +  I++  G   ++   +       L   + +L++ V+   G I  S+          AV
Sbjct: 69  TPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLVMIVLWNAGYIIRSMHNIDPALADKAV 128

Query: 135 EYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNM 190
            Y   L  GA   LF  +A     G   TK  M    LG ++NI ++ IFIY    +  +
Sbjct: 129 GYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFLGLLVNIPVNYIFIYGHFGMPEL 188

Query: 191 GVAGAAWATLLSLVITGILFVYW-LFIKKDTFLK-------ISFEK--FKLDINIIKEIF 240
           G  G   AT           VYW +FI   +++K       I  EK   K D  ++K + 
Sbjct: 189 GGIGCGVATAA---------VYWVMFIAMLSYIKHARSMRDIRNEKGFGKPDSVVMKRLI 239

Query: 241 SIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVV 300
            +GLP +++ L    ++F + A++    G   +A         S+  +  + LA  VT+ 
Sbjct: 240 QLGLPIALA-LFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIR 298

Query: 301 TGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSEN-SVHILEGL 359
            G   G  +    + + +  L +GI +  + A   +     I  L  Y++N  V  L   
Sbjct: 299 VGYRLGQGSTLDAQTAARTGLGVGICMAVVTAIFTVTLRKHIALL--YNDNPEVVALAAQ 356

Query: 360 LVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFG----IIF 415
           L+ L  ++    ++   ++ + + +G     +  FI+     +L +P  Y       ++ 
Sbjct: 357 LMLLAAVYQISDSIQ--VIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYILALTDLVVD 414

Query: 416 NQGLTGVWFGMILGHVIAVSIAYLLGIYTIRQ 447
             G  G W G I+G   A  +  L   Y  RQ
Sbjct: 415 RMGPAGFWMGFIIGLTSAAVLMMLRMRYLQRQ 446