Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 448 a.a., MATE family efflux transporter from Fusobacterium nucleatum SB010

 Score =  137 bits (344), Expect = 9e-37
 Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 6/425 (1%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           K I +I++P V  +  Q+L    D + VA LG  A++++G+    M+A++     V  G 
Sbjct: 15  KNIFQITIPAVFDLLAQTLIMAFDMMMVASLGPTAISSVGVGTAAMYALIPALIAVATGT 74

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIIIGILL-IGVIPFLGAIFSLIG-ASGITVTMA 133
           ++ +SR  G NNK         S  + I +GI L +  + F   I +L+G A  + +  A
Sbjct: 75  TALLSRAFGANNKIEGKKAFAQSFFIAIPLGIFLTVMFLIFSKEIINLVGNAKDMNLKDA 134

Query: 134 VEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVA 193
           + Y  +   G   L  +       R  G+ K  M    L  +L I+L+ + I++   GV 
Sbjct: 135 ILYQNMTVIGFPFLAISISTFYAFRAMGENKIPMIGNTLALILKILLNYLLIHIFKWGVF 194

Query: 194 GAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLTM 253
           GAA +T L+ + + I  +Y +F  K  ++ +  +  K D    K I  +G+PA++  L +
Sbjct: 195 GAALSTTLTRLSSAIFSIYLVFWSKKNWISLQIKDLKFDYFTAKRILKVGIPAAMEQLGL 254

Query: 254 AFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEKL 313
              M +   +V    GN   A         S+        A   + + G   G  + +K 
Sbjct: 255 RIGMLIFEMMVISL-GNLAYAAHKIALTAESISYNLGFAFAFAASALVGQELGKGSSKKA 313

Query: 314 EISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFYPTL 373
                    + ++V +    L  I  + +  LFT   +   ++E     LK + +  P  
Sbjct: 314 LKDGYICTMIAMIVMSTFGLLFFIMPHFLVSLFT---DDKKVIELSTTALKIVSICQPFS 370

Query: 374 PLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGHVIA 433
              ++ A   +G     + LFI+ L   +++IP  Y F  I N GL G W  M +   I 
Sbjct: 371 GASLVLAGSLRGAGDTKSVLFITFLGIFLIRIPTTYLFLDILNFGLAGAWIVMTIDLFIR 430

Query: 434 VSIAY 438
            S+ Y
Sbjct: 431 SSLLY 435



 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 12/213 (5%)

Query: 235 IIKEIFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSM-GTIP-LVG 292
           +IK IF I +PA    L     M     +VA  G     A+ S G    +M   IP L+ 
Sbjct: 13  LIKNIFQITIPAVFDLLAQTLIMAFDMMMVASLGPT---AISSVGVGTAAMYALIPALIA 69

Query: 293 LATGVTVVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENS 352
           +ATG T +   A+G+ N  + + ++  +  + I +   +  + LIF  +I  L   +++ 
Sbjct: 70  VATGTTALLSRAFGANNKIEGKKAFAQSFFIAIPLGIFLTVMFLIFSKEIINLVGNAKDM 129

Query: 353 VHILEGLLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFG 412
              L+  +++     + +P L + + T   F+ + + N    I     +IL+I + Y   
Sbjct: 130 --NLKDAILYQNMTVIGFPFLAISISTFYAFRAMGE-NKIPMIGNTLALILKILLNYLLI 186

Query: 413 IIFNQGLTGVWFGMILGHVIAVSIAYLLGIYTI 445
            IF  G+    FG  L   +    + +  IY +
Sbjct: 187 HIFKWGV----FGAALSTTLTRLSSAIFSIYLV 215



 Score = 45.4 bits (106), Expect = 4e-09
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           K I+K+ +P  +      +  +I  + V  LG+ A AA            +IS  +G   
Sbjct: 238 KRILKVGIPAAMEQLGLRIGMLIFEMMVISLGNLAYAA----HKIALTAESISYNLGFAF 293

Query: 76  SSAISRRIGQ-----NNKDAADNIAVHSIVLGIIIGI--LLIGVIP-FLGAIFSLIGASG 127
           + A S  +GQ     ++K A  +  + +++  I++    LL  ++P FL ++F+      
Sbjct: 294 AFAASALVGQELGKGSSKKALKDGYICTMIAMIVMSTFGLLFFIMPHFLVSLFTDDKKVI 353

Query: 128 ITVTMAVEYSTIL--FGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVL-NIVLDPIF 184
              T A++  +I   F GA ++L  +     LRG GDTK  ++   LG  L  I    +F
Sbjct: 354 ELSTTALKIVSICQPFSGASLVLAGS-----LRGAGDTKSVLFITFLGIFLIRIPTTYLF 408

Query: 185 IYVLNMGVAGAAWATLLSLVITGILFVY 212
           + +LN G+AGA     + L I   L  Y
Sbjct: 409 LDILNFGLAGAWIVMTIDLFIRSSLLYY 436