Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 480 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Erwinia tracheiphila SCR3

 Score =  133 bits (335), Expect = 1e-35
 Identities = 112/428 (26%), Positives = 189/428 (44%), Gaps = 17/428 (3%)

Query: 24  PMVIAMSFQSL----YNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGGSSAI 79
           P+ + + F++L      V+    V+ LG +A+A +GL   F   +++    + +G +  +
Sbjct: 36  PLAVPIFFENLCVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVVISFFAAIDLGTTVVV 95

Query: 80  SRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGA-IFSLIG--ASGITVTMAVEY 136
           +  +G+ N++ A+     S+VL  +  ILL   I   G  I  LI   A      +A+ Y
Sbjct: 96  AFSLGKLNRERAEAATRQSLVLMTVFAILLATGIELFGEQIIDLIAENAEPQVKELALVY 155

Query: 137 STILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL----NMGV 192
             I            I    LRG G+TK  M      ++LNIV   + IY       MG 
Sbjct: 156 LGITAWSYPAAAIALIGCGALRGAGNTKIPMLINGGMNILNIVFSTVLIYGCFGWKGMGF 215

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKF--KLDINIIKEIFSIGLPASISH 250
           AGA     LS  +  +  +Y L I  +  LKI+   +  +LD  I+KE+  IG+PASI  
Sbjct: 216 AGAGLGLTLSRYVGAVAVIYVLVIGFNPQLKITLRSYFSRLDTGILKEVLGIGVPASIES 275

Query: 251 LTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANP 310
           +       LLT +     G D IA     + I SM  +P   L +  T++ G   G    
Sbjct: 276 VLFNGGK-LLTQVFVAGMGTDVIAGNFIAFSIASMINLPGNALGSTATIIVGTRLGKGQL 334

Query: 311 EKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFY 370
            + E   K    +  L    +AAL       +   +T  ++ +H+++ +L++L   F+  
Sbjct: 335 GQPERQLKTIFWLSNLCLCFLAALSAPLAGVLASFYTQEDDVIHVVK-ILIWLNAAFM-- 391

Query: 371 PTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGH 430
           P      +  A  +G      ++++S+L     +I   YT G++   G+ GVW GM+L  
Sbjct: 392 PIWAASWVLPAGLKGARDARFTMWVSMLGMWGCRIIAGYTLGVMLGFGVVGVWLGMVLDW 451

Query: 431 VIAVSIAY 438
           ++     Y
Sbjct: 452 IVRAIFFY 459



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 14/203 (6%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           K ++ I +P  I     +   ++  ++VAG+G+D +A  G F  F  A M    G  +G 
Sbjct: 262 KEVLGIGVPASIESVLFNGGKLLTQVFVAGMGTDVIA--GNFIAFSIASMINLPGNALGS 319

Query: 76  SSAI-------SRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGI 128
           ++ I         ++GQ  +       + ++ L  +  +      P  G + S       
Sbjct: 320 TATIIVGTRLGKGQLGQPERQLKTIFWLSNLCLCFLAAL----SAPLAGVLASFYTQEDD 375

Query: 129 TVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGS-VLNIVLDPIFIYV 187
            + +      +      +   + +  A L+G  D +  M+  +LG     I+       +
Sbjct: 376 VIHVVKILIWLNAAFMPIWAASWVLPAGLKGARDARFTMWVSMLGMWGCRIIAGYTLGVM 435

Query: 188 LNMGVAGAAWATLLSLVITGILF 210
           L  GV G     +L  ++  I F
Sbjct: 436 LGFGVVGVWLGMVLDWIVRAIFF 458