Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 378 a.a., putative multidrug ABC transporter permease YbhS from Xanthobacter sp. DMC5

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 21/202 (10%)

Query: 62  LIPGVVSMTVFSGSFI-SGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQG 120
           ++PG++   +     I + ++V  + + G ++  L  P    E +LG+I    +  ++Q 
Sbjct: 185 IVPGLLGTILTMTMLIFTALSVTREIERGTMESLLSMPIHPVEIMLGKITPYVLVGILQA 244

Query: 121 VLIMVLSLFLVSLNPFGMIPVIFTSFILAVA---FASVGISLG-----LKINSQEGFHLI 172
           +LIM   + L     FG +P+  ++ +LAVA   F  V +S+G     L  N  +   + 
Sbjct: 245 LLIMGAGMIL-----FG-VPLEGSAILLAVATLLFIVVNLSIGYTFSTLAQNQLQAVQMS 298

Query: 173 FGLLMQPLIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFL---AGFSRFPIMLDV 229
           F +   P I LSG  +P   MP W + +    PLT+ +   R  L   +GFS   +  D 
Sbjct: 299 F-MFFLPSILLSGFMFPFSGMPLWAQWIGEGLPLTHYLRMVRGILLKGSGFS--DLTTDA 355

Query: 230 SILIVLSVFLVVLAMYTFEKAV 251
             L+VL +  + +A+  F + +
Sbjct: 356 GALVVLMLVAMAIAVARFRQTL 377