Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 288 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 9/236 (3%)

Query: 5   SAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIP 64
           S +  R+L RF + K R + +L+ PLVWL  F  G+               V Y  Y+ P
Sbjct: 27  SGIVGRELLRFVQQKERFLSALVRPLVWLFIFAAGFRSTLGVSIIPPYETYVLYEVYVTP 86

Query: 65  GVVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQG-VLI 123
           G+  M        S +++++D++ G ++  L +P  R   +L +++     +L Q  V +
Sbjct: 87  GLAVMIQLFNGMQSSLSMVYDREVGSMRVLLTSPFPRWYLLLSKLVAGVSVSLAQVYVFL 146

Query: 124 MVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIFL 183
            +  L+ V + P G +  +    +  +   ++G+ +   I   E F  +   ++ P+ F 
Sbjct: 147 AIARLWEVDIPPMGYLTALPAFILTGLMLGAIGLVISSLIRQLENFASVMNFVIFPMFFA 206

Query: 184 SGAFYPI----DAMPTWMKILAYINPLTYAVDSARYFLAGF---SRFPIMLDVSIL 232
           S A YP+    DA  T + I+  +NP T+AV+  R  L G      F ++L  +I+
Sbjct: 207 SSALYPLWRIRDASET-LYIVCLLNPFTHAVELVRNALYGAFEPQAFAVVLGTTIV 261