Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 254 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 10/241 (4%)

Query: 6   AMFYRQLRRFTRAKSRVIGS-LLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIP 64
           A+ Y++  RF +   + +G+ +L  L++L+ FG              ++G V Y  +L+P
Sbjct: 9   ALLYKETLRFWKVGFQTVGAPVLTALLYLMVFG------HVLEGRVTVYGTVGYTAFLVP 62

Query: 65  GVVSMTVFSGSFI-SGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLI 123
           G+V M+V   +F  S  ++I  K  G L   L+ P S        +    I  L  G+ +
Sbjct: 63  GLVMMSVLQNAFANSSSSIIQSKIMGNLVFVLLTPLSHWGWFFAYVGSSIIRGLAVGLGV 122

Query: 124 MVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIFL 183
            ++++     +    + +I  + + A    ++G+  GL     +   +    L+ P+ FL
Sbjct: 123 FLVTMLFAVPDFVAPLWIIVFALLGAAMLGTLGLIAGLWAEKFDQMAVFQNFLIMPMTFL 182

Query: 184 SGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFLVVLA 243
           SG FY I ++P + + ++++NP  Y +D  RY   G S     L  S+ IV + +LVV A
Sbjct: 183 SGVFYSIGSLPPFWQKVSHLNPFFYMIDGFRYGFFGVSDASPWL--SLGIVGTAWLVVSA 240

Query: 244 M 244
           +
Sbjct: 241 I 241