Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 265 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  100 bits (249), Expect = 3e-26
 Identities = 59/240 (24%), Positives = 119/240 (49%), Gaps = 9/240 (3%)

Query: 6   AMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIPG 65
           A+  R+L +F++   R++ +L+ PL+WL  F  G+   F           + Y  Y++PG
Sbjct: 3   AIVLRELFKFSQQTGRLVSALVRPLLWLAVFAAGFRNVFGVAIVEPYDTYIPYDVYIVPG 62

Query: 66  VVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLIMV 125
           +V M +      S + +++D++ G ++  L AP  R   +  ++   ++ +++Q +  ++
Sbjct: 63  LVGMVLLFNGMQSSLAMVYDREMGLMRLLLTAPLPRPWLLFSKLCATALLSVLQALAFVI 122

Query: 126 LSLFLVSLNPFGMIPVIFTSFIL---AVAFASVGISLGLKINSQEGFHLIFGLLMQPLIF 182
           +++ + +  P   +  +     L   A+   ++G+ L + I   E F      ++ P+ F
Sbjct: 123 VAVLIGTELPLVSLAGLHALVALAAGALMLGALGLLLSVHIKQLENFAGTMNFVIFPMYF 182

Query: 183 LSGAFYPI----DAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVF 238
           LS A YP+    ++   W+  LA  NP TYAV+  R+ L G  + P +    +L  L+VF
Sbjct: 183 LSTALYPLWKLQESGAEWVYQLARFNPFTYAVEWVRFALYG--KDPGLAPYVVLGCLAVF 240