Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 282 a.a., Efflux ABC transporter, permease protein from Sphingobium sp. HT1-2

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 12/249 (4%)

Query: 6   AMFYRQLRRFTRAKSRVIGS-LLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIP 64
           A++ +++RRF + + + I +  +  L++LV F I    A      R++ G V +  ++ P
Sbjct: 35  ALYRKEVRRFMKVQLQTIWAPAVTTLMFLVIFTIALGGA-----NRQVLG-VPFADFIAP 88

Query: 65  GVVSMTVFSGSFI-SGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLI 123
           G++ M + + +F  S  +++  K  G L + L+ P S  E +L  ++G ++T  +   L 
Sbjct: 89  GLMMMGMMNNAFANSSFSLLAGKMQGTLIDYLMPPLSVGELLLA-LVGAAVTRAVAVGLA 147

Query: 124 MVLSLFL---VSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPL 180
           +  ++ L   V + P  +  VI+   + A   A +G+   +     +    I   ++ P+
Sbjct: 148 LWGAMALWPGVHVTPTHLWAVIWFGLMGASLTAFIGVMTSIWAEKFDHAAAITNFVIGPM 207

Query: 181 IFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFLV 240
             LSG FY ID +    + +++ NP  YA+   RY     +   +++   +L+ L+  L 
Sbjct: 208 TLLSGTFYSIDRLSPLFRAISHANPFFYAISGFRYGFVAAADGNVLVGSVVLLALNAGLA 267

Query: 241 VLAMYTFEK 249
           VL      K
Sbjct: 268 VLCYVLLRK 276