Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 256 a.a., Efflux ABC transporter, permease protein from Sphingobium sp. HT1-2

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 18/248 (7%)

Query: 3   AFSAMFYRQLRRFTRA--KSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLT 60
           A +A++  +L RF R      ++  +   L ++VF G   SR            G+ Y  
Sbjct: 8   AVAAIYKFELHRFRRTWLTGLLVPVITTSLYFIVFGGAIGSRMTQID-------GIPYAA 60

Query: 61  YLIPGVVSMTVFSGSFISGVTVIWDKQF-GFLKETLVAPTSRSEAILGRIMGDSITALIQ 119
           +++PG++ M++F+ S  +    I+  +F G + E L AP S  E ++  +   +  ALI 
Sbjct: 61  FIVPGLIMMSMFTESIFNASFGIYMPKFTGTIYELLSAPVSAMETVIAYVGAAATKALIV 120

Query: 120 GVLIMVLSLFLVSL---NPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLL 176
           G +I   +   V L   +PF M+  +    ++AV+F   G  LG+     E   +I  L+
Sbjct: 121 GFIIFATAHLFVDLPVAHPFAMVGFML---LIAVSFCLFGFILGIWAQGFEQLQVIPLLI 177

Query: 177 MQPLIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLS 236
           + P+ FL GAFY I  +    + +   NP+ Y +   R+    F +  + ++ S+L V  
Sbjct: 178 ITPMTFLGGAFYSIHMLAEPWRTITLFNPIVYLISGFRWTF--FGKGDVGIEFSLLFVGG 235

Query: 237 VFLVVLAM 244
           +  V L +
Sbjct: 236 MLAVCLGI 243