Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 263 a.a., ABC transporter from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 8e-27
 Identities = 61/248 (24%), Positives = 125/248 (50%), Gaps = 7/248 (2%)

Query: 4   FSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLI 63
           F+ +  R+  RF   ++R++ +L+ PL+WL+ F  G+  A            + Y  Y+I
Sbjct: 8   FNGIMLREWLRFVLQRTRLLSALVRPLLWLLVFAAGFRAALGIAIIEPYDTYIPYEVYII 67

Query: 64  PGVVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLI 123
           PG+  M +        +++++D++ G ++  L +P  R   +  +++  S+ +L+Q    
Sbjct: 68  PGLACMILLFNGMQGSLSMVYDREMGSMRVLLTSPLPRPFLLGSKLLATSLISLLQVYAF 127

Query: 124 MVLS-LFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIF 182
           + ++ L+ V     G++  +    ++A   +++G+ L   I   E F  +   ++ PL F
Sbjct: 128 LAIAWLYGVQPPAAGLLMALPALLLVAFMLSALGLLLSNAIRQLENFAGVMNFVIFPLFF 187

Query: 183 LSGAFYPIDAM---PTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFL 239
           LS A YP+  M     W+  L  +NP T+AV+  R+ L  + R   +L +++ + L+   
Sbjct: 188 LSSALYPLWKMREASQWLYWLCAVNPFTHAVELVRFAL--YERLN-LLALAVCLGLTALF 244

Query: 240 VVLAMYTF 247
            +LA+ TF
Sbjct: 245 TLLAILTF 252